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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:853.3 nTPM
GTEx:853.3 nTPM
FANTOM5:976.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045423Antibody CAB011536
Squamous epithelial cells Not detectedMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 853.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 853.3
Samples: 156

Max nTPM: 2196.0
Min nTPM: 315.5
Std nTPM: 408.2
Median nTPM: 764.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2196.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2085.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1949.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 1777.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1738.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1698.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1685.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1680.9
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1606.4
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1571.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1570.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1529.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 1527.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1524.2
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1523.6
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1508.3
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1418.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1408.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1389.2
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1375.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1366.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1340.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1314.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1301.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1299.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1286.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1285.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1227.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1225.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1220.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1185.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1176.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1173.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1161.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1137.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1131.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1127.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1110.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1105.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1104.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1104.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1103.2
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1097.1
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1086.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1072.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1045.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1031.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1031.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1012.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1009.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 996.0
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 956.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 943.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 919.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 915.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 910.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 909.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 904.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 885.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 884.6
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 884.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 874.1
GTEX-1C475-0526-SM-793AC 40-49 years, female 867.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 862.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 855.3
GTEX-16NPV-2526-SM-6M483 50-59 years, female 839.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 836.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 826.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 816.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 809.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 804.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 803.1
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 802.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 792.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 784.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 779.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 777.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 765.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 763.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 763.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 749.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 744.2
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 742.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 726.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 723.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 722.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 718.2
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 703.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 702.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 697.4
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 688.8
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 688.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 669.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 664.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 663.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 657.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 655.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 652.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 651.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 648.3
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 646.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 637.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 629.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 619.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 611.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 608.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 604.9
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 601.9
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 589.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 568.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 564.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 554.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 544.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 544.3
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 536.8
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 517.5
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 513.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 513.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 504.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 502.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 499.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 495.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 480.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 475.9
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 466.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 453.7
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 453.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 452.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 441.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 440.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 422.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 422.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 420.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 418.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 416.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 410.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 409.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 408.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 407.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 405.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 401.5
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 390.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 388.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 388.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 388.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 387.0
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 383.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 381.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 377.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 365.1
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 360.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 360.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 331.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 320.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 316.6
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 315.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 976.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 976.5
FF:10204-103F6 68 years, female 976.5

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The Human Protein Atlas project is funded
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