HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:219.4 nTPM
HPA:219.4 nTPM
GTEx:205.4 nTPM
FANTOM5:216.4 Scaled Tags Per Million
Pig:88.6 nTPM
Mouse:61.9 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008476
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 219.4
Sample id Sample description nTPM
Hippocampus
nTPM: 183.9
2529 Female, age 94, left hemisphere 227.8
2621 Female, age 67, right hemisphere 188.6
1911 Female, age 85, right hemisphere 180.5
1855 Male, age 76, left hemisphere 173.0
2148 Female, age 91, left hemisphere 169.8
1898 Male, age 80, left hemisphere 163.7
Dentate gyrus
nTPM: 184.8
2530 Female, age 94, left hemisphere 264.5
2010 Male, age 76, both hemispheres 203.6
2531 Female, age 67, both hemispheres 184.8
2246 Female, age 85, both hemispheres 163.7
2528 Male, age 74, both hemispheres 153.6
1927 Female, age 91, both hemispheres 138.5
Entorhinal gyrus
nTPM: 209.2
2686 Male, age 75, right hemisphere 277.5
2117 Female, age 91, right hemisphere 258.0
2764 Male, age 80, right hemisphere 201.1
2613 Female, age 94, left hemisphere 189.2
1938 Female, age 85, left hemisphere 168.8
1787 Male, age 76, left hemisphere 160.8
Hippocampus, CA1
nTPM: 157.7
2527 Male, age 74, both hemispheres 169.8
2082 Female, age 91, right hemisphere 166.5
1873 Female, age 85, both hemispheres 162.9
2749 Male, age 80, left hemisphere 149.2
2045 Male, age 76, both hemispheres 140.1
Hippocampus, CA2
nTPM: 178.9
1963 Male, age 80, left hemisphere 223.9
2437 Female, age 94, left hemisphere 199.6
2113 Female, age 91, right hemisphere 177.6
1940 Female, age 85, left hemisphere 170.6
2249 Male, age 74, both hemispheres 154.7
1892 Male, age 76, both hemispheres 146.8
Hippocampus, CA3
nTPM: 154.4
1891 Female, age 85, both hemispheres 201.3
1867 Male, age 76, both hemispheres 166.3
2861 Female, age 67, both hemispheres 163.3
2137 Male, age 80, left hemisphere 136.4
2620 Female, age 94, left hemisphere 136.0
2436 Male, age 74, both hemispheres 123.2
Parahippocampal cortex
nTPM: 174.0
2692 Male, age 74, both hemispheres 224.5
2532 Female, age 72, left hemisphere 220.1
2622 Female, age 67, right hemisphere 182.0
2018 Male, age 76, both hemispheres 179.8
2245 Female, age 91, both hemispheres 173.6
1990 Female, age 91, right hemisphere 170.4
1850 Male, age 80, both hemispheres 161.8
1933 Female, age 85, both hemispheres 156.1
2693 Female, age 94, both hemispheres 141.1
2250 Female, age 67, right hemisphere 130.7
Perirhinal gyrus
nTPM: 137.5
2848 Male, age 76, right hemisphere 148.3
1794 Male, age 80, right hemisphere 140.0
2521 Female, age 94, right hemisphere 134.9
1847 Female, age 91, left hemisphere 134.8
1841 Female, age 85, right hemisphere 129.5
Subiculum
nTPM: 219.4
2438 Female, age 94, left hemisphere 271.6
2042 Male, age 76, both hemispheres 255.0
1901 Male, age 80, both hemispheres 232.3
1977 Female, age 85, both hemispheres 193.0
2619 Male, age 74, both hemispheres 188.2
2729 Female, age 91, right hemisphere 176.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 205.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 205.4
Samples: 197

Max nTPM: 773.6
Min nTPM: 55.6
Std nTPM: 123.0
Median nTPM: 168.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 773.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 739.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 555.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 543.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 541.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 528.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 511.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 474.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 465.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 453.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 451.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 216.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 216.4
FF:10153-102I9 76 years, female 284.3
FF:10169-103B7 60 years, female 148.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 88.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 88.6
Samples: 4

Max nTPM: 117.2
Min nTPM: 53.4
Sample A Female 117.2
Sample B Female 79.9
Sample C Male 103.8
Sample D Male 53.4
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 64.2
Min nTPM: 51.8
Sample A Female 52.4
Sample B Female 64.2
Sample C Male 51.8
Sample D Male 52.2
Subiculum
nTPM: 61.7
Samples: 4

Max nTPM: 71.0
Min nTPM: 53.9
Sample A Female 71.0
Sample B Female 67.6
Sample C Male 53.9
Sample D Male 54.3
Ventral hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 81.0
Min nTPM: 57.9
Sample A Female 70.6
Sample B Female 57.9
Sample C Male 79.4
Sample D Male 81.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.0
Samples: 4

Max nTPM: 55.6
Min nTPM: 42.2
Sample A Male 55.6
Sample B Male 49.4
Sample C Female 48.7
Sample D Female 42.2
Hippocampal formation
nTPM: 61.8
Samples: 4

Max nTPM: 73.0
Min nTPM: 54.5
Sample A Male 54.5
Sample B Male 59.1
Sample C Female 73.0
Sample D Female 60.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69752041 Antisense, RP_050505_01_A02, Mouse strain C57BL/6J (56 days, male) 7.5

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