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RPL31
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

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No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:1804.2 nTPM
HPA:1804.2 nTPM
FANTOM5:89.9 Scaled Tags Per Million
Pig:613.5 nTPM

PONS - HPA Brain RNA-seq
Max nTPM 1804.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1773.8
2188 Female, age 91, both hemispheres 1837.0
2090 Male, age 80, both hemispheres 1794.3
2301 Female, age 85, both hemispheres 1753.4
1984 Male, age 76, both hemispheres 1710.6
Dorsal cochlear nucleus
nTPM: 1757.6
2187 Female, age 91, both hemispheres 1797.4
2802 Male, age 74, right hemisphere 1787.2
2370 Male, age 61, both hemispheres 1740.3
2378 Male, age 80, both hemispheres 1735.2
2058 Male, age 76, both hemispheres 1727.8
Dorsal tegmental nucleus
nTPM: 1779.3
2326 Male, age 74, both hemispheres 1812.1
2083 Male, age 80, both hemispheres 1799.1
1936 Male, age 76, left hemisphere 1754.7
2358 Male, age 61, both hemispheres 1751.1
Dorsolateral tegmental area
nTPM: 1773.9
2654 Male, age 80, both hemispheres 1819.7
2337 Male, age 61, both hemispheres 1806.7
2751 Female, age 85, both hemispheres 1785.7
2360 Male, age 74, both hemispheres 1734.5
2141 Male, age 76, both hemispheres 1723.2
Kolliker-Fuse nucleus
nTPM: 1779.4
2793 Female, age 91, left hemisphere 1792.7
2315 Male, age 76, right hemisphere 1785.5
2163 Male, age 80, both hemispheres 1759.8
Lateral lemniscal nuclei
nTPM: 1731.3
2169 Male, age 76, both hemispheres 1754.2
2453 Male, age 74, right hemisphere 1752.7
2320 Female, age 91, left hemisphere 1741.5
2746 Female, age 85, left hemisphere 1723.9
2036 Male, age 80, both hemispheres 1684.0
Lateral parabrachial nucleus
nTPM: 1779.4
2792 Male, age 76, both hemispheres 1825.8
2013 Male, age 80, both hemispheres 1787.0
2139 Female, age 85, right hemisphere 1760.8
2790 Male, age 61, both hemispheres 1744.1
Lateral vestibular nucleus
nTPM: 1759.8
2311 Male, age 80, both hemispheres 1790.8
2184 Male, age 76, both hemispheres 1728.8
Locus coeruleus
nTPM: 1740.3
2720 Male, age 74, both hemispheres 1780.6
2123 Female, age 91, both hemispheres 1759.6
2162 Male, age 80, both hemispheres 1747.3
2317 Female, age 72, unknown 1744.2
2014 Male, age 55, unknown 1732.1
2788 Male, age 74, unknown 1714.2
1980 Male, age 76, both hemispheres 1704.1
Medial olivary nucleus
nTPM: 1804.2
1943 Male, age 61, both hemispheres 1850.2
2138 Female, age 91, both hemispheres 1796.7
1962 Male, age 76, both hemispheres 1796.3
2851 Male, age 80, both hemispheres 1773.8
Medial parabrachial nucleus
nTPM: 1777.1
2170 Female, age 91, both hemispheres 1842.4
2463 Female, age 85, right hemisphere 1778.9
2156 Male, age 61, both hemispheres 1776.0
2854 Male, age 80, both hemispheres 1746.3
2786 Male, age 76, both hemispheres 1741.6
Medial periolivary nuclei
nTPM: 1750.6
2063 Male, age 76, both hemispheres 1778.5
2791 Male, age 74, right hemisphere 1760.8
2081 Male, age 80, both hemispheres 1752.5
2458 Female, age 91, both hemispheres 1748.6
2171 Female, age 85, both hemispheres 1712.4
Motor facial nucleus
nTPM: 1750.5
2126 Male, age 61, both hemispheres 1775.8
2795 Female, age 91, both hemispheres 1768.3
2365 Male, age 74, right hemisphere 1760.9
2062 Male, age 76, both hemispheres 1759.0
2697 Female, age 85, both hemispheres 1739.2
2327 Male, age 80, both hemispheres 1699.5
Motor trigeminal nucleus
nTPM: 1753.2
2309 Male, age 76, both hemispheres 1768.0
2560 Male, age 74, both hemispheres 1758.9
2321 Female, age 91, both hemispheres 1752.1
2335 Male, age 61, both hemispheres 1746.2
2079 Male, age 80, both hemispheres 1741.0
Nuclei of the trapezoid body
nTPM: 1748.4
1983 Male, age 76, both hemispheres 1817.1
2166 Male, age 80, both hemispheres 1740.7
2159 Male, age 61, both hemispheres 1735.6
2368 Female, age 91, both hemispheres 1733.0
2735 Female, age 85, both hemispheres 1715.5
Paramedian reticular nucleus
nTPM: 1760.7
2313 Male, age 61, both hemispheres 1765.8
2050 Female, age 85, both hemispheres 1763.6
2057 Male, age 80, both hemispheres 1762.4
2052 Male, age 76, both hemispheres 1751.1
Pontine nuclei
nTPM: 1761.2
2319 Female, age 91, both hemispheres 1800.7
1863 Male, age 55, unknown 1788.5
2454 Male, age 74, left hemisphere 1767.8
2787 Female, age 85, both hemispheres 1767.5
2109 Female, age 72, unknown 1750.5
1968 Male, age 76, left hemisphere 1743.2
2115 Male, age 80, left hemisphere 1739.2
2727 Male, age 61, right hemisphere 1732.6
Pontine raphe nucleus
nTPM: 1751.8
2853 Male, age 76, midline 1752.3
2122 Female, age 85, midline 1751.3
Posteroventral cochlear nucleus
nTPM: 1790.5
2135 Female, age 91, both hemispheres 1859.9
2341 Male, age 80, both hemispheres 1838.8
2752 Female, age 85, both hemispheres 1776.1
2371 Male, age 61, both hemispheres 1747.9
2070 Male, age 76, both hemispheres 1729.7
Principal sensory trigeminal nucleus
nTPM: 1733.0
2367 Female, age 91, left hemisphere 1765.7
2008 Male, age 80, left hemisphere 1731.0
2324 Male, age 76, both hemispheres 1726.9
2158 Male, age 61, both hemispheres 1708.4
Reticular pontine nucleus, caudal
nTPM: 1770.0
2559 Male, age 74, both hemispheres 1828.2
2092 Male, age 76, both hemispheres 1796.1
2457 Female, age 91, both hemispheres 1764.2
2332 Male, age 80, right hemisphere 1691.3
Reticular pontine nucleus, oral
nTPM: 1772.5
2366 Female, age 91, both hemispheres 1832.7
1939 Male, age 80, both hemispheres 1786.5
2167 Male, age 76, both hemispheres 1760.5
2361 Male, age 74, both hemispheres 1747.8
2012 Female, age 85, both hemispheres 1735.2
Reticulotegmental nucleus
nTPM: 1767.7
2452 Male, age 74, both hemispheres 1783.2
2322 Female, age 91, both hemispheres 1771.4
2325 Male, age 76, both hemispheres 1764.1
2333 Male, age 80, both hemispheres 1752.2
Spinal trigeminal nucleus, oral
nTPM: 1736.5
1978 Male, age 76, both hemispheres 1741.5
2164 Male, age 80, both hemispheres 1741.3
2737 Female, age 85, both hemispheres 1726.9
Subcoeruleus area
nTPM: 1774.5
2451 Male, age 74, both hemispheres 1825.7
2369 Female, age 85, left hemisphere 1790.1
1958 Male, age 80, both hemispheres 1771.2
2323 Female, age 91, left hemisphere 1760.2
2089 Male, age 76, left hemisphere 1725.1
Superior olive
nTPM: 1747.6
2020 Male, age 76, both hemispheres 1810.7
1875 Female, age 85, both hemispheres 1746.5
2561 Female, age 91, both hemispheres 1743.7
2364 Male, age 74, right hemisphere 1725.1
2329 Male, age 80, right hemisphere 1711.9
Superior vestibular nucleus
nTPM: 1777.4
2015 Male, age 80, both hemispheres 1803.3
2383 Male, age 74, both hemispheres 1785.7
2061 Male, age 76, both hemispheres 1743.2
Ventral periolivary nuclei
nTPM: 1759.7
2023 Male, age 76, both hemispheres 1812.7
2794 Female, age 91, left hemisphere 1768.4
2165 Male, age 80, both hemispheres 1753.1
2130 Female, age 85, both hemispheres 1704.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1741.3
1959 Male, age 76, both hemispheres 1767.4
2359 Male, age 61, both hemispheres 1747.0
2161 Male, age 80, both hemispheres 1746.8
2449 Male, age 74, both hemispheres 1731.2
2840 Female, age 85, both hemispheres 1727.8
2456 Female, age 91, both hemispheres 1727.4

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 89.9
FF:10165-103B3 76 years, female 90.6
FF:10182-103D2 60 years, female 89.3
Pons
Scaled Tags Per Million: 61.8
FF:10033-101E6 18-54 years, mixed 61.8

PONS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 613.5
Pig sample Sample description nTPM
Pons
nTPM: 613.6
Samples: 4

Max nTPM: 713.7
Min nTPM: 463.5
Sample A Female 713.7
Sample B Female 463.5
Sample C Male 704.5
Sample D Male 572.5

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by the Knut & Alice Wallenberg Foundation.