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RPL31
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:636.0 nTPM
GTEx:636.0 nTPM
FANTOM5:68.8 Scaled Tags Per Million
Pig:164.8 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 636.0
GTEx sample id Sample description nTPM
Retina
Average nTPM: 636.0
Samples: 105

Max nTPM: 895.2
Min nTPM: 415.3
Std nTPM: 95.7
Median nTPM:
379_1 60 years, male 895.2
384_1 83 years, male 876.3
375_1 74 years, female 818.5
321_1 62 years, female 803.0
237_1 82 years, male 801.7
376_1 75 years, female 800.7
35_1 74 years, female 788.9
389_1 86 years, female 787.2
246_1 77 years, male 782.8
322_1 76 years, male 778.4
120_1 70 years, female 764.6
452_1 88 years, female 761.9
153_1 70 years, female 757.9
173_1 67 years, male 753.9
307_1 66 years, female 750.7
320_1 89 years, female 747.3
377_1 82 years, female 744.3
347_1 72 years, male 735.1
145_1 84 years, male 732.2
17_1 71 years, male 722.2
4_1 88 years, female 721.3
396_1 62 years, male 720.5
526_1 61 years, male 718.6
495_1 57 years, female 714.6
189_1 76 years, male 710.7
394_1 75 years, female 708.1
2_1 77 years, female 699.5
137_1 83 years, male 691.8
319_1 81 years, male 686.6
126_1 63 years, male 685.3
386_1 76 years, male 684.7
315_1 62 years, female 684.1
447_1 81 years, male 682.8
308_1 70 years, female 680.3
311_1 78 years, male 676.5
404_1 82 years, female 670.1
109_1 81 years, female 664.1
265_1 87 years, male 664.0
499_1 55 years, female 663.9
218_1 71 years, female 662.9
266_1 85 years, male 659.6
139_1 64 years, female 656.8
501_1 88 years, male 646.7
177_1 74 years, male 645.4
518_1 75 years, female 641.3
314_1 67 years, male 639.9
229_1 69 years, female 638.8
119_1 70 years, female 638.7
42_1 85 years, male 636.7
355_1 70 years, female 633.4
254_1 77 years, female 632.8
348_1 84 years, male 630.8
405_1 91 years, male 630.6
317_1 60 years, male 626.4
243_1 75 years, male 624.9
288_1 66 years, female 623.9
6_1 73 years, female 620.2
217_1 76 years, male 620.2
316_1 62 years, male 618.1
18_1 88 years, male 611.8
351_1 91 years, male 611.5
295_1 61 years, female 611.4
117_1 61 years, male 606.6
162_1 79 years, female 603.8
142_1 61 years, female 603.2
414_1 84 years, female 601.9
349_1 83 years, male 596.6
335_1 73 years, female 595.4
264_1 73 years, female 594.5
406_1 79 years, male 590.4
324_1 76 years, male 589.4
480_1 63 years, male 588.1
251_1 78 years, male 585.6
354_1 81 years, female 580.6
468_1 89 years, male 579.2
318_1 68 years, male 575.0
415_1 77 years, female 574.2
291_1 76 years, male 570.8
286_1 68 years, female 569.8
506_1 65 years, male 568.0
517_1 88 years, male 567.1
172_1 72 years, female 560.8
115_1 83 years, male 556.9
353_1 82 years, female 555.0
466_1 57 years, female 552.1
503_1 68 years, male 551.7
163_1 78 years, male 551.4
99_1 64 years, male 542.3
313_1 79 years, female 540.6
350_1 84 years, female 540.1
81_1 67 years, male 529.6
356_1 87 years, female 529.2
352_1 62 years, male 524.0
292_1 71 years, male 521.5
89_1 63 years, male 521.0
491_1 89 years, female 512.2
425_1 59 years, female 500.2
41_1 94 years, female 494.6
9_1 66 years, female 494.1
293_1 68 years, female 485.6
43_1 64 years, female 480.0
32_1 67 years, male 473.2
490_1 67 years, female 471.3
413_1 59 years, female 441.6
149_1 88 years, male 415.3
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 68.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 68.8
FF:10030-101E3 24-65 years, mixed 68.8

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 164.8
Pig sample Sample description nTPM
Retina
nTPM: 164.8
Samples: 4

Max nTPM: 180.8
Min nTPM: 150.0
Sample A Female 158.1
Sample B Female 170.2
Sample C Male 180.8
Sample D Male 150.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.