HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:2355.6 nTPM
HPA:2355.6 nTPM
GTEx:1387.7 nTPM
FANTOM5:2115.7 Scaled Tags Per Million
Pig:1695.7 nTPM
Mouse:1083.0 nTPM
Allen mouse:25.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041264Antibody HPA041271Antibody CAB002621
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumNot detectedMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2355.6
Sample id Sample description nTPM
Hippocampus
nTPM: 2216.2
1898 Male, age 80, left hemisphere 2386.1
2621 Female, age 67, right hemisphere 2313.0
1855 Male, age 76, left hemisphere 2294.1
1911 Female, age 85, right hemisphere 2187.6
2529 Female, age 94, left hemisphere 2068.8
2148 Female, age 91, left hemisphere 2047.5
Dentate gyrus
nTPM: 2236.6
2530 Female, age 94, left hemisphere 2580.2
2010 Male, age 76, both hemispheres 2396.0
1927 Female, age 91, both hemispheres 2256.9
2246 Female, age 85, both hemispheres 2162.8
2528 Male, age 74, both hemispheres 2057.0
2531 Female, age 67, both hemispheres 1966.6
Entorhinal gyrus
nTPM: 2118.7
2764 Male, age 80, right hemisphere 2213.7
1938 Female, age 85, left hemisphere 2211.3
1787 Male, age 76, left hemisphere 2150.0
2613 Female, age 94, left hemisphere 2142.4
2117 Female, age 91, right hemisphere 2135.9
2686 Male, age 75, right hemisphere 1859.2
Hippocampus, CA1
nTPM: 2355.6
2749 Male, age 80, left hemisphere 3189.5
1873 Female, age 85, both hemispheres 2246.4
2045 Male, age 76, both hemispheres 2160.4
2527 Male, age 74, both hemispheres 2148.0
2082 Female, age 91, right hemisphere 2033.8
Hippocampus, CA2
nTPM: 2246.7
1963 Male, age 80, left hemisphere 2540.9
1892 Male, age 76, both hemispheres 2302.7
2249 Male, age 74, both hemispheres 2223.9
2437 Female, age 94, left hemisphere 2200.6
1940 Female, age 85, left hemisphere 2128.8
2113 Female, age 91, right hemisphere 2083.3
Hippocampus, CA3
nTPM: 2220.6
2137 Male, age 80, left hemisphere 2893.2
1867 Male, age 76, both hemispheres 2300.8
2436 Male, age 74, both hemispheres 2099.4
2620 Female, age 94, left hemisphere 2058.1
1891 Female, age 85, both hemispheres 2035.9
2861 Female, age 67, both hemispheres 1936.0
Parahippocampal cortex
nTPM: 2124.3
2250 Female, age 67, right hemisphere 2340.7
2245 Female, age 91, both hemispheres 2307.5
2532 Female, age 72, left hemisphere 2219.5
2018 Male, age 76, both hemispheres 2170.7
1933 Female, age 85, both hemispheres 2157.5
1850 Male, age 80, both hemispheres 2143.7
1990 Female, age 91, right hemisphere 2117.8
2693 Female, age 94, both hemispheres 2003.1
2692 Male, age 74, both hemispheres 1928.8
2622 Female, age 67, right hemisphere 1853.9
Perirhinal gyrus
nTPM: 2231.4
2521 Female, age 94, right hemisphere 2301.6
1794 Male, age 80, right hemisphere 2282.8
1841 Female, age 85, right hemisphere 2248.9
1847 Female, age 91, left hemisphere 2238.1
2848 Male, age 76, right hemisphere 2085.5
Subiculum
nTPM: 2174.0
1901 Male, age 80, both hemispheres 2348.7
2042 Male, age 76, both hemispheres 2331.6
1977 Female, age 85, both hemispheres 2205.4
2438 Female, age 94, left hemisphere 2096.4
2729 Female, age 91, right hemisphere 2057.6
2619 Male, age 74, both hemispheres 2004.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1387.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1387.7
Samples: 197

Max nTPM: 2993.5
Min nTPM: 625.1
Std nTPM: 473.7
Median nTPM: 1262.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 2993.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 2849.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 2714.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 2581.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2537.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 2526.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 2500.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 2495.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2487.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 2473.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 2455.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2115.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2115.7
FF:10169-103B7 60 years, female 2570.9
FF:10153-102I9 76 years, female 1660.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1695.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1695.7
Samples: 4

Max nTPM: 2413.7
Min nTPM: 1249.9
Sample A Female 2413.7
Sample B Female 1548.4
Sample C Male 1570.9
Sample D Male 1249.9
Entorhinal cortex
nTPM: 1103.9
Samples: 4

Max nTPM: 1295.2
Min nTPM: 917.6
Sample A Female 1295.2
Sample B Female 1101.9
Sample C Male 1100.8
Sample D Male 917.6
Subiculum
nTPM: 1143.6
Samples: 4

Max nTPM: 1512.0
Min nTPM: 936.0
Sample A Female 1512.0
Sample B Female 1047.7
Sample C Male 1078.8
Sample D Male 936.0
Ventral hippocampus
nTPM: 1456.6
Samples: 4

Max nTPM: 1744.5
Min nTPM: 934.6
Sample A Female 1434.4
Sample B Female 934.6
Sample C Male 1712.9
Sample D Male 1744.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1083.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 769.4
Samples: 4

Max nTPM: 800.5
Min nTPM: 722.8
Sample A Male 786.7
Sample B Male 722.8
Sample C Female 767.7
Sample D Female 800.5
Hippocampal formation
nTPM: 1083.0
Samples: 4

Max nTPM: 1188.1
Min nTPM: 1039.4
Sample A Male 1039.4
Sample B Male 1057.3
Sample C Female 1188.1
Sample D Female 1047.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.7
74881516 Antisense, RP_060315_04_C04, Mouse strain C57BL/6J (56 days, male) 28.3
81600126 Antisense, RP_080306_03_B07, Mouse strain C57BL/6J (56 days, male) 27.7
69514684 Antisense, RP_050419_03_H03, Mouse strain C57BL/6J (56 days, male) 21.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.