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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1324.2
Min nTPM: 241.6
Std nTPM: 168.0
Median nTPM:
308_1
70 years, female
1324.2
17_1
71 years, male
877.3
315_1
62 years, female
873.6
307_1
66 years, female
811.7
501_1
88 years, male
803.7
295_1
61 years, female
799.5
288_1
66 years, female
763.6
495_1
57 years, female
758.2
452_1
88 years, female
734.3
137_1
83 years, male
728.1
491_1
89 years, female
707.3
41_1
94 years, female
698.8
379_1
60 years, male
688.3
4_1
88 years, female
666.0
354_1
81 years, female
661.3
109_1
81 years, female
654.9
162_1
79 years, female
637.1
2_1
77 years, female
636.6
145_1
84 years, male
634.2
316_1
62 years, male
633.6
120_1
70 years, female
617.4
218_1
71 years, female
617.0
384_1
83 years, male
594.4
139_1
64 years, female
590.6
349_1
83 years, male
589.4
351_1
91 years, male
587.6
43_1
64 years, female
574.8
518_1
75 years, female
553.9
314_1
67 years, male
550.8
142_1
61 years, female
549.1
353_1
82 years, female
547.2
394_1
75 years, female
542.4
173_1
67 years, male
539.4
322_1
76 years, male
534.3
254_1
77 years, female
527.0
335_1
73 years, female
523.9
42_1
85 years, male
519.5
414_1
84 years, female
517.5
189_1
76 years, male
516.6
6_1
73 years, female
509.2
396_1
62 years, male
506.2
119_1
70 years, female
505.5
447_1
81 years, male
501.0
18_1
88 years, male
500.9
117_1
61 years, male
491.2
35_1
74 years, female
490.5
317_1
60 years, male
488.9
490_1
67 years, female
479.7
350_1
84 years, female
477.8
313_1
79 years, female
475.2
413_1
59 years, female
470.6
386_1
76 years, male
458.1
377_1
82 years, female
457.6
319_1
81 years, male
453.6
126_1
63 years, male
445.6
324_1
76 years, male
444.8
389_1
86 years, female
443.9
291_1
76 years, male
435.0
89_1
63 years, male
412.4
347_1
72 years, male
409.4
376_1
75 years, female
408.8
311_1
78 years, male
408.7
404_1
82 years, female
407.3
526_1
61 years, male
407.1
265_1
87 years, male
405.3
286_1
68 years, female
402.3
415_1
77 years, female
400.5
264_1
73 years, female
399.2
153_1
70 years, female
397.0
375_1
74 years, female
396.2
266_1
85 years, male
393.4
243_1
75 years, male
390.1
163_1
78 years, male
385.5
466_1
57 years, female
385.2
506_1
65 years, male
382.8
320_1
89 years, female
380.0
468_1
89 years, male
377.9
81_1
67 years, male
374.3
348_1
84 years, male
364.1
352_1
62 years, male
363.1
115_1
83 years, male
359.2
149_1
88 years, male
356.0
237_1
82 years, male
351.0
32_1
67 years, male
348.3
177_1
74 years, male
343.8
9_1
66 years, female
343.1
251_1
78 years, male
338.9
318_1
68 years, male
338.1
425_1
59 years, female
328.7
499_1
55 years, female
326.8
356_1
87 years, female
325.8
517_1
88 years, male
324.2
406_1
79 years, male
314.7
503_1
68 years, male
308.7
321_1
62 years, female
307.9
405_1
91 years, male
305.5
480_1
63 years, male
296.5
99_1
64 years, male
295.6
292_1
71 years, male
294.6
217_1
76 years, male
294.2
293_1
68 years, female
292.7
229_1
69 years, female
289.1
355_1
70 years, female
286.5
172_1
72 years, female
283.1
246_1
77 years, male
241.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.