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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2457.9 nTPM
HPA:2457.9 nTPM
GTEx:1985.5 nTPM
FANTOM5:3368.2 Scaled Tags Per Million
Pig:2382.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 2457.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 2304.6
1981 Female, age 72, midline 2564.8
2565 Male, age 75, midline 2310.9
2816 Male, age 47, midline 2271.4
2194 Female, age 79, both hemispheres 2238.7
2048 Male, age 55, midline 2137.3
Cervical spinal cord, dorsal horn
nTPM: 2446.2
2173 Female, age 72, unknown 2747.4
2296 Male, age 66, both hemispheres 2661.3
2069 Male, age 47, both hemispheres 2555.1
2721 Male, age 90, both hemispheres 2252.3
1877 Male, age 55, unknown 2242.5
2297 Male, age 75, both hemispheres 2218.3
Cervical spinal cord, ventral horn
nTPM: 2457.9
2098 Female, age 72, unknown 2893.2
2295 Male, age 66, both hemispheres 2494.0
2480 Male, age 75, both hemispheres 2469.9
2809 Male, age 90, both hemispheres 2464.0
2068 Male, age 55, unknown 2284.3
2820 Female, age 79, both hemispheres 2142.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1985.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1985.5
Samples: 159

Max nTPM: 3325.3
Min nTPM: 781.4
Std nTPM: 530.5
Median nTPM: 1993.3
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 3325.3
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 3317.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 3259.0
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 3182.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 3143.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 3121.3
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 3112.7
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 3105.2
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 3002.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 2940.3
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 2891.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 2854.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 2850.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 2828.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2810.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 2806.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 2686.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 2671.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 2648.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 2639.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 2626.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 2593.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 2553.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2535.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2529.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 2525.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 2492.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 2429.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 2416.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2411.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 2386.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 2370.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 2339.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 2337.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 2332.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 2323.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 2259.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 2258.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 2247.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 2241.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 2241.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 2235.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 2229.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 2229.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 2223.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 2203.2
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 2200.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 2198.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 2187.4
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 2180.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 2174.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2158.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 2157.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 2153.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 2149.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 2147.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 2147.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2147.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 2136.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 2135.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 2122.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 2114.3
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 2102.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 2096.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 2096.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 2077.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 2077.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 2075.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 2064.6
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 2063.3
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 2045.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2039.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 2038.8
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 2037.5
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 2036.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2025.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 2011.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 2007.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1994.3
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1993.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1993.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1977.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1960.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1944.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 1940.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1940.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 1924.8
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1921.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1903.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1902.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1896.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1889.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 1881.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1830.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1826.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1817.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1812.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1810.5
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1797.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1786.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1774.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1750.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1743.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 1733.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1731.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1727.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1714.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1710.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1697.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1677.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 1674.8
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 1662.9
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1647.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1643.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1616.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1598.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 1598.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1593.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1593.3
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1591.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 1562.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1561.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1545.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1544.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1537.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1521.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1519.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1514.7
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1506.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1502.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1494.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 1483.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1481.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1471.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1470.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1464.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1461.4
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1407.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1402.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1395.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 1365.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 1355.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 1345.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1336.4
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1322.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1306.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1293.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1271.6
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 1259.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 1249.8
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 1247.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1229.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1109.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1061.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1039.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 992.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 979.4
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 906.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 781.4
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 3368.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 3368.2
FF:10181-103D1 60 years, female 3403.9
FF:10159-103A6 76 years, female 3332.5

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2382.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 2146.7
Samples: 4

Max nTPM: 2620.2
Min nTPM: 1769.5
Sample A Female 1769.5
Sample B Female 2123.9
Sample C Male 2620.2
Sample D Male 2073.1
Ventral spinal cord
nTPM: 2382.0
Samples: 4

Max nTPM: 2487.7
Min nTPM: 2268.1
Sample A Female 2268.1
Sample B Female 2370.5
Sample C Male 2401.8
Sample D Male 2487.7

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