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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2223.5 nTPM
GTEx:2223.5 nTPM
FANTOM5:3656.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041264Antibody HPA041271Antibody CAB002621
Squamous epithelial cells MediumNot detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2223.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2223.5
Samples: 156

Max nTPM: 6030.0
Min nTPM: 580.6
Std nTPM: 982.4
Median nTPM: 2101.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 6030.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 5604.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 5551.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 4683.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 4578.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 4505.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 4340.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 4155.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 4152.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 4105.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 3937.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 3922.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 3868.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 3822.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3688.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 3645.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 3426.3
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3360.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 3183.2
GTEX-14PKU-1326-SM-6871B 40-49 years, female 3158.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 3084.1
GTEX-QCQG-1226-SM-48U23 50-59 years, female 3084.1
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 3045.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 3004.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2954.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2896.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2892.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 2892.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2844.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 2815.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2796.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2765.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 2757.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 2754.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2738.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 2717.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2714.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 2704.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2697.1
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 2696.4
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 2651.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 2642.0
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2614.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 2606.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 2602.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 2588.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 2528.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2525.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 2515.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 2514.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 2507.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2478.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2466.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 2451.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2448.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 2425.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 2406.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2400.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 2368.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2360.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 2340.2
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 2333.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2327.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 2324.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 2292.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2284.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2262.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2233.9
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2215.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2210.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2201.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 2182.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2162.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 2157.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2138.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 2130.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2117.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2103.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2099.9
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 2073.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 2064.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 2028.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1995.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1984.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1962.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1947.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 1903.3
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1902.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1895.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 1892.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1878.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1834.3
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1824.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1819.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1811.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1808.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1791.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1778.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1778.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1756.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1742.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 1740.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1737.4
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1728.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1665.7
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1649.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1641.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1637.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1617.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1597.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1588.9
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1585.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1545.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1538.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1530.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1524.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1491.5
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1485.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1483.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1472.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1464.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1462.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1443.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1435.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1401.4
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1398.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1391.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1379.0
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1362.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1339.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1334.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1319.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1314.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1295.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1260.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1257.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1228.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1221.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1221.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1219.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1212.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1212.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1141.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1083.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1040.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1037.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1028.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1012.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1009.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 979.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 929.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 878.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 862.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 834.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 744.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 580.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 3656.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 3656.6
FF:10204-103F6 68 years, female 3656.6

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