HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:128.9 nTPM
HPA:128.9 nTPM
GTEx:172.4 nTPM
FANTOM5:363.8 Scaled Tags Per Million
Pig:180.9 nTPM
Mouse:318.9 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006964Antibody CAB037131
Glial cells MediumMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.9
Sample id Sample description nTPM
Hippocampus
nTPM: 126.5
1855 Male, age 76, left hemisphere 138.7
1898 Male, age 80, left hemisphere 132.0
2621 Female, age 67, right hemisphere 129.7
2529 Female, age 94, left hemisphere 127.4
1911 Female, age 85, right hemisphere 117.3
2148 Female, age 91, left hemisphere 113.9
Dentate gyrus
nTPM: 115.7
2010 Male, age 76, both hemispheres 125.9
2528 Male, age 74, both hemispheres 123.2
2246 Female, age 85, both hemispheres 122.8
1927 Female, age 91, both hemispheres 118.5
2530 Female, age 94, left hemisphere 108.9
2531 Female, age 67, both hemispheres 94.7
Entorhinal gyrus
nTPM: 110.7
1938 Female, age 85, left hemisphere 123.2
2117 Female, age 91, right hemisphere 122.4
1787 Male, age 76, left hemisphere 114.3
2764 Male, age 80, right hemisphere 109.6
2613 Female, age 94, left hemisphere 103.8
2686 Male, age 75, right hemisphere 91.1
Hippocampus, CA1
nTPM: 126.4
2749 Male, age 80, left hemisphere 147.5
1873 Female, age 85, both hemispheres 126.1
2045 Male, age 76, both hemispheres 125.4
2527 Male, age 74, both hemispheres 121.2
2082 Female, age 91, right hemisphere 111.5
Hippocampus, CA2
nTPM: 121.3
2249 Male, age 74, both hemispheres 147.5
1892 Male, age 76, both hemispheres 125.9
1963 Male, age 80, left hemisphere 120.1
2113 Female, age 91, right hemisphere 112.8
1940 Female, age 85, left hemisphere 112.5
2437 Female, age 94, left hemisphere 109.1
Hippocampus, CA3
nTPM: 123.8
2137 Male, age 80, left hemisphere 147.3
2436 Male, age 74, both hemispheres 145.1
1867 Male, age 76, both hemispheres 127.1
1891 Female, age 85, both hemispheres 123.7
2620 Female, age 94, left hemisphere 108.6
2861 Female, age 67, both hemispheres 90.7
Parahippocampal cortex
nTPM: 123.3
2250 Female, age 67, right hemisphere 144.5
2245 Female, age 91, both hemispheres 134.4
2532 Female, age 72, left hemisphere 129.1
1850 Male, age 80, both hemispheres 123.9
2018 Male, age 76, both hemispheres 123.0
1933 Female, age 85, both hemispheres 121.9
2692 Male, age 74, both hemispheres 119.1
1990 Female, age 91, right hemisphere 114.7
2693 Female, age 94, both hemispheres 111.9
2622 Female, age 67, right hemisphere 110.8
Perirhinal gyrus
nTPM: 127.1
2521 Female, age 94, right hemisphere 138.5
1847 Female, age 91, left hemisphere 132.7
1841 Female, age 85, right hemisphere 128.5
2848 Male, age 76, right hemisphere 121.6
1794 Male, age 80, right hemisphere 114.5
Subiculum
nTPM: 128.9
2438 Female, age 94, left hemisphere 153.0
2042 Male, age 76, both hemispheres 134.4
2619 Male, age 74, both hemispheres 130.1
2729 Female, age 91, right hemisphere 119.6
1901 Male, age 80, both hemispheres 118.9
1977 Female, age 85, both hemispheres 117.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 172.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 172.4
Samples: 197

Max nTPM: 239.1
Min nTPM: 111.7
Std nTPM: 26.1
Median nTPM: 168.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 239.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 238.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 232.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 232.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 231.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 230.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 230.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 229.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 226.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 225.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 224.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 363.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 363.8
FF:10169-103B7 60 years, female 378.7
FF:10153-102I9 76 years, female 348.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 180.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 180.9
Samples: 4

Max nTPM: 237.2
Min nTPM: 127.6
Sample A Female 237.2
Sample B Female 162.8
Sample C Male 195.9
Sample D Male 127.6
Entorhinal cortex
nTPM: 159.2
Samples: 4

Max nTPM: 180.3
Min nTPM: 143.1
Sample A Female 180.3
Sample B Female 156.3
Sample C Male 157.2
Sample D Male 143.1
Subiculum
nTPM: 158.7
Samples: 4

Max nTPM: 198.2
Min nTPM: 144.0
Sample A Female 198.2
Sample B Female 145.3
Sample C Male 147.1
Sample D Male 144.0
Ventral hippocampus
nTPM: 163.2
Samples: 4

Max nTPM: 201.3
Min nTPM: 114.8
Sample A Female 168.5
Sample B Female 114.8
Sample C Male 201.3
Sample D Male 168.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 318.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 310.3
Samples: 4

Max nTPM: 325.7
Min nTPM: 300.8
Sample A Male 300.8
Sample B Male 312.1
Sample C Female 302.7
Sample D Female 325.7
Hippocampal formation
nTPM: 318.9
Samples: 4

Max nTPM: 337.8
Min nTPM: 304.1
Sample A Male 325.8
Sample B Male 304.1
Sample C Female 337.8
Sample D Female 308.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
532633 Antisense, RP_040810_02_G08, Mouse strain C57BL/6J (56 days, male) 20.9

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