HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:228.3 nTPM
HPA:228.3 nTPM
GTEx:211.4 nTPM
FANTOM5:285.0 Scaled Tags Per Million
Pig:177.8 nTPM
Mouse:435.6 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040736
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 228.3
Sample id Sample description nTPM
Hippocampus
nTPM: 171.0
2621 Female, age 67, right hemisphere 200.2
1898 Male, age 80, left hemisphere 192.1
2529 Female, age 94, left hemisphere 164.4
1855 Male, age 76, left hemisphere 159.8
1911 Female, age 85, right hemisphere 155.4
2148 Female, age 91, left hemisphere 153.8
Dentate gyrus
nTPM: 160.7
1927 Female, age 91, both hemispheres 194.1
2530 Female, age 94, left hemisphere 174.5
2246 Female, age 85, both hemispheres 158.4
2531 Female, age 67, both hemispheres 155.4
2010 Male, age 76, both hemispheres 154.1
2528 Male, age 74, both hemispheres 127.5
Entorhinal gyrus
nTPM: 179.5
2613 Female, age 94, left hemisphere 231.8
1938 Female, age 85, left hemisphere 192.7
1787 Male, age 76, left hemisphere 184.4
2764 Male, age 80, right hemisphere 171.4
2686 Male, age 75, right hemisphere 158.2
2117 Female, age 91, right hemisphere 138.7
Hippocampus, CA1
nTPM: 171.4
2749 Male, age 80, left hemisphere 237.6
1873 Female, age 85, both hemispheres 176.8
2045 Male, age 76, both hemispheres 158.2
2527 Male, age 74, both hemispheres 152.2
2082 Female, age 91, right hemisphere 132.0
Hippocampus, CA2
nTPM: 166.9
1963 Male, age 80, left hemisphere 218.3
1892 Male, age 76, both hemispheres 194.4
2437 Female, age 94, left hemisphere 173.4
1940 Female, age 85, left hemisphere 159.4
2113 Female, age 91, right hemisphere 139.3
2249 Male, age 74, both hemispheres 116.4
Hippocampus, CA3
nTPM: 170.7
2620 Female, age 94, left hemisphere 206.7
2137 Male, age 80, left hemisphere 201.7
2861 Female, age 67, both hemispheres 183.2
1867 Male, age 76, both hemispheres 156.1
1891 Female, age 85, both hemispheres 151.8
2436 Male, age 74, both hemispheres 124.4
Parahippocampal cortex
nTPM: 178.5
1850 Male, age 80, both hemispheres 215.1
2245 Female, age 91, both hemispheres 194.2
2622 Female, age 67, right hemisphere 194.1
1933 Female, age 85, both hemispheres 185.6
2532 Female, age 72, left hemisphere 184.2
2693 Female, age 94, both hemispheres 176.3
1990 Female, age 91, right hemisphere 166.9
2250 Female, age 67, right hemisphere 158.1
2018 Male, age 76, both hemispheres 155.5
2692 Male, age 74, both hemispheres 155.1
Perirhinal gyrus
nTPM: 228.3
1847 Female, age 91, left hemisphere 262.7
1794 Male, age 80, right hemisphere 250.9
1841 Female, age 85, right hemisphere 235.0
2521 Female, age 94, right hemisphere 201.0
2848 Male, age 76, right hemisphere 191.7
Subiculum
nTPM: 160.2
1977 Female, age 85, both hemispheres 179.3
2619 Male, age 74, both hemispheres 177.6
2438 Female, age 94, left hemisphere 174.6
1901 Male, age 80, both hemispheres 167.1
2042 Male, age 76, both hemispheres 132.2
2729 Female, age 91, right hemisphere 130.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 211.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 211.4
Samples: 197

Max nTPM: 448.5
Min nTPM: 113.8
Std nTPM: 60.4
Median nTPM: 201.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 448.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 441.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 440.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 428.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 391.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 384.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 359.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 343.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 327.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 316.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 315.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 285.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 285.0
FF:10153-102I9 76 years, female 305.4
FF:10169-103B7 60 years, female 264.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 177.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 147.3
Samples: 4

Max nTPM: 182.6
Min nTPM: 119.3
Sample A Female 182.6
Sample B Female 158.4
Sample C Male 128.7
Sample D Male 119.3
Entorhinal cortex
nTPM: 177.8
Samples: 4

Max nTPM: 192.0
Min nTPM: 152.0
Sample A Female 182.3
Sample B Female 184.9
Sample C Male 192.0
Sample D Male 152.0
Subiculum
nTPM: 152.7
Samples: 4

Max nTPM: 207.9
Min nTPM: 130.6
Sample A Female 207.9
Sample B Female 140.9
Sample C Male 130.6
Sample D Male 131.4
Ventral hippocampus
nTPM: 130.6
Samples: 4

Max nTPM: 153.5
Min nTPM: 105.9
Sample A Female 119.8
Sample B Female 105.9
Sample C Male 153.5
Sample D Male 143.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 435.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 435.6
Samples: 4

Max nTPM: 494.1
Min nTPM: 405.1
Sample A Male 417.0
Sample B Male 426.3
Sample C Female 405.1
Sample D Female 494.1
Hippocampal formation
nTPM: 370.5
Samples: 4

Max nTPM: 395.6
Min nTPM: 334.1
Sample A Male 386.7
Sample B Male 365.4
Sample C Female 395.6
Sample D Female 334.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
61413 Antisense, RP_040407_01_C10, Mouse strain C57BL/6J (56 days, male) 15.8
68203457 Antisense, RP_041208_01_A04, Mouse strain C57BL/6J (56 days, male) 11.5
70786827 Antisense, RP_050706_03_D02, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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