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GNB1
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:2629.0 nTPM
GTEx:2629.0 nTPM
FANTOM5:452.3 Scaled Tags Per Million
Pig:592.8 nTPM
Mouse:6293.7 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2629.0
GTEx sample id Sample description nTPM
Retina
Average nTPM: 2629.0
Samples: 105

Max nTPM: 4416.9
Min nTPM: 944.3
Std nTPM: 759.2
Median nTPM:
229_1 69 years, female 4416.9
172_1 72 years, female 4353.0
405_1 91 years, male 3882.3
237_1 82 years, male 3863.4
386_1 76 years, male 3863.3
352_1 62 years, male 3854.3
316_1 62 years, male 3827.9
6_1 73 years, female 3759.5
126_1 63 years, male 3716.6
425_1 59 years, female 3614.1
324_1 76 years, male 3579.5
153_1 70 years, female 3541.5
9_1 66 years, female 3538.0
81_1 67 years, male 3512.7
35_1 74 years, female 3491.8
217_1 76 years, male 3480.5
246_1 77 years, male 3404.9
480_1 63 years, male 3341.7
415_1 77 years, female 3336.1
162_1 79 years, female 3320.2
319_1 81 years, male 3319.4
43_1 64 years, female 3317.0
447_1 81 years, male 3298.6
286_1 68 years, female 3237.1
177_1 74 years, male 3201.7
251_1 78 years, male 3178.7
189_1 76 years, male 3175.0
518_1 75 years, female 3170.1
355_1 70 years, female 3074.5
354_1 81 years, female 3052.3
375_1 74 years, female 3037.5
32_1 67 years, male 3034.4
335_1 73 years, female 3031.7
115_1 83 years, male 3028.9
322_1 76 years, male 3020.6
466_1 57 years, female 2967.1
163_1 78 years, male 2894.9
526_1 61 years, male 2894.5
404_1 82 years, female 2892.5
117_1 61 years, male 2886.2
389_1 86 years, female 2884.5
468_1 89 years, male 2858.5
406_1 79 years, male 2853.5
499_1 55 years, female 2818.1
321_1 62 years, female 2816.8
142_1 61 years, female 2815.4
266_1 85 years, male 2807.2
396_1 62 years, male 2803.4
243_1 75 years, male 2802.0
347_1 72 years, male 2764.6
320_1 89 years, female 2760.6
292_1 71 years, male 2702.0
377_1 82 years, female 2700.5
376_1 75 years, female 2699.4
348_1 84 years, male 2653.7
318_1 68 years, male 2641.1
490_1 67 years, female 2622.5
218_1 71 years, female 2585.7
353_1 82 years, female 2574.5
503_1 68 years, male 2569.1
149_1 88 years, male 2526.8
414_1 84 years, female 2518.9
350_1 84 years, female 2475.3
137_1 83 years, male 2443.8
99_1 64 years, male 2415.8
356_1 87 years, female 2399.9
265_1 87 years, male 2368.3
293_1 68 years, female 2364.4
18_1 88 years, male 2347.6
291_1 76 years, male 2340.2
145_1 84 years, male 2339.4
349_1 83 years, male 2303.8
495_1 57 years, female 2279.7
379_1 60 years, male 2262.0
517_1 88 years, male 2224.5
394_1 75 years, female 2188.6
264_1 73 years, female 2145.3
311_1 78 years, male 2078.1
254_1 77 years, female 2062.0
315_1 62 years, female 2038.0
288_1 66 years, female 2010.7
313_1 79 years, female 1991.8
17_1 71 years, male 1976.0
384_1 83 years, male 1905.6
120_1 70 years, female 1883.3
413_1 59 years, female 1874.4
139_1 64 years, female 1819.6
2_1 77 years, female 1751.1
506_1 65 years, male 1688.1
351_1 91 years, male 1683.6
307_1 66 years, female 1666.5
109_1 81 years, female 1659.2
42_1 85 years, male 1648.2
491_1 89 years, female 1585.9
119_1 70 years, female 1569.0
4_1 88 years, female 1553.6
173_1 67 years, male 1551.5
317_1 60 years, male 1425.8
89_1 63 years, male 1418.2
314_1 67 years, male 1382.3
501_1 88 years, male 1364.2
452_1 88 years, female 1288.9
295_1 61 years, female 1098.8
308_1 70 years, female 1042.5
41_1 94 years, female 944.3
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 452.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 452.3
FF:10030-101E3 24-65 years, mixed 452.3

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 592.8
Pig sample Sample description nTPM
Retina
nTPM: 592.8
Samples: 4

Max nTPM: 647.5
Min nTPM: 534.6
Sample A Female 534.6
Sample B Female 642.1
Sample C Male 647.5
Sample D Male 546.8

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 6293.7
Mouse sample Sample description nTPM
Retina
nTPM: 6293.7
Samples: 4

Max nTPM: 6968.0
Min nTPM: 5632.6
Sample A Male 6968.0
Sample B Male 6013.2
Sample C Female 5632.6
Sample D Female 6561.1

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.