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HSP90AA1
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1216.2 nTPM
HPA:1216.2 nTPM
GTEx:696.7 nTPM
FANTOM5:1856.1 Scaled Tags Per Million
Pig:777.1 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1216.2
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1194.2
1981 Female, age 72, midline 1246.8
2048 Male, age 55, midline 1219.0
2194 Female, age 79, both hemispheres 1198.5
2565 Male, age 75, midline 1167.6
2816 Male, age 47, midline 1139.3
Cervical spinal cord, dorsal horn
nTPM: 1216.2
2296 Male, age 66, both hemispheres 1339.6
2173 Female, age 72, unknown 1315.0
2069 Male, age 47, both hemispheres 1247.6
1877 Male, age 55, unknown 1160.6
2297 Male, age 75, both hemispheres 1125.9
2721 Male, age 90, both hemispheres 1108.6
Cervical spinal cord, ventral horn
nTPM: 1203.7
2068 Male, age 55, unknown 1246.2
2480 Male, age 75, both hemispheres 1228.3
2098 Female, age 72, unknown 1213.2
2809 Male, age 90, both hemispheres 1212.0
2295 Male, age 66, both hemispheres 1168.0
2820 Female, age 79, both hemispheres 1154.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 696.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 696.7
Samples: 159

Max nTPM: 5548.5
Min nTPM: 261.9
Std nTPM: 566.7
Median nTPM: 540.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 5548.5
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 3169.2
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2322.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 2067.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 2042.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 2010.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1904.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 1800.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1769.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1502.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1478.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1403.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1392.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1337.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1142.6
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1097.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1020.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 1018.6
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1001.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 998.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 933.9
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 913.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 895.0
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 833.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 825.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 808.6
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 796.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 785.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 775.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 773.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 766.7
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 751.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 740.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 738.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 736.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 734.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 732.5
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 728.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 723.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 722.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 709.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 690.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 678.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 671.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 664.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 647.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 647.1
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 637.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 631.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 620.0
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 618.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 613.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 612.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 607.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 604.5
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 596.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 596.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 595.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 594.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 594.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 594.4
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 592.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 588.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 587.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 584.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 576.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 571.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 571.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 570.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 568.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 566.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 561.6
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 557.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 554.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 547.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 546.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 544.9
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 543.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 540.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 540.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 538.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 538.3
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 536.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 532.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 530.6
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 530.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 529.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 529.0
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 528.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 528.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 528.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 518.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 518.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 515.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 509.8
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 500.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 497.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 495.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 491.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 489.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 488.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 484.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 483.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 481.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 480.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 478.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 478.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 475.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 474.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 474.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 473.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 472.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 467.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 467.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 466.9
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 466.1
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 465.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 464.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 463.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 461.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 461.5
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 461.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 455.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 452.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 452.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 450.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 446.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 445.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 444.8
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 444.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 442.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 442.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 430.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 427.0
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 423.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 419.7
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 419.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 416.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 414.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 409.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 399.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 377.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 375.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 371.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 365.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 360.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 357.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 356.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 356.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 354.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 350.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 348.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 339.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 338.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 320.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 305.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 268.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 263.4
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 261.9
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1856.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 1856.1
FF:10159-103A6 76 years, female 2565.0
FF:10181-103D1 60 years, female 1147.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 777.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 669.7
Samples: 4

Max nTPM: 694.7
Min nTPM: 637.8
Sample A Female 654.2
Sample B Female 694.7
Sample C Male 637.8
Sample D Male 691.9
Ventral spinal cord
nTPM: 777.1
Samples: 4

Max nTPM: 866.2
Min nTPM: 706.9
Sample A Female 759.4
Sample B Female 775.9
Sample C Male 706.9
Sample D Male 866.2

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