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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 387.0
Min nTPM: 23.3
Std nTPM: 79.9
Median nTPM:
321_1
62 years, female
387.0
218_1
71 years, female
359.4
352_1
62 years, male
350.3
319_1
81 years, male
341.6
320_1
89 years, female
321.3
353_1
82 years, female
314.5
354_1
81 years, female
310.2
355_1
70 years, female
309.8
386_1
76 years, male
299.5
163_1
78 years, male
290.6
350_1
84 years, female
287.8
243_1
75 years, male
282.0
356_1
87 years, female
281.5
377_1
82 years, female
276.2
349_1
83 years, male
268.2
452_1
88 years, female
268.0
177_1
74 years, male
262.2
335_1
73 years, female
259.2
351_1
91 years, male
254.9
376_1
75 years, female
252.2
172_1
72 years, female
251.5
394_1
75 years, female
250.0
317_1
60 years, male
235.9
447_1
81 years, male
234.8
389_1
86 years, female
234.5
506_1
65 years, male
231.7
251_1
78 years, male
229.2
293_1
68 years, female
227.7
425_1
59 years, female
226.3
295_1
61 years, female
224.9
406_1
79 years, male
224.6
292_1
71 years, male
223.6
322_1
76 years, male
223.0
404_1
82 years, female
221.9
318_1
68 years, male
221.8
379_1
60 years, male
219.6
316_1
62 years, male
218.6
6_1
73 years, female
216.5
189_1
76 years, male
214.3
503_1
68 years, male
213.4
405_1
91 years, male
213.0
347_1
72 years, male
210.8
99_1
64 years, male
208.5
173_1
67 years, male
204.4
384_1
83 years, male
197.0
526_1
61 years, male
195.8
153_1
70 years, female
193.0
237_1
82 years, male
191.5
115_1
83 years, male
190.8
229_1
69 years, female
189.9
286_1
68 years, female
189.8
480_1
63 years, male
187.6
4_1
88 years, female
184.4
17_1
71 years, male
182.2
35_1
74 years, female
180.6
375_1
74 years, female
174.0
246_1
77 years, male
173.6
517_1
88 years, male
171.3
145_1
84 years, male
170.8
137_1
83 years, male
170.3
2_1
77 years, female
168.9
291_1
76 years, male
168.5
120_1
70 years, female
166.8
264_1
73 years, female
165.2
18_1
88 years, male
163.4
348_1
84 years, male
159.5
266_1
85 years, male
152.8
518_1
75 years, female
152.0
265_1
87 years, male
150.0
254_1
77 years, female
149.6
311_1
78 years, male
148.7
396_1
62 years, male
147.2
126_1
63 years, male
139.6
468_1
89 years, male
137.1
109_1
81 years, female
136.7
217_1
76 years, male
132.2
9_1
66 years, female
131.2
307_1
66 years, female
127.5
41_1
94 years, female
125.3
324_1
76 years, male
119.6
117_1
61 years, male
111.6
288_1
66 years, female
105.9
119_1
70 years, female
105.6
499_1
55 years, female
104.6
314_1
67 years, male
104.3
139_1
64 years, female
103.1
162_1
79 years, female
99.1
308_1
70 years, female
98.7
42_1
85 years, male
97.0
313_1
79 years, female
92.6
315_1
62 years, female
91.9
81_1
67 years, male
91.0
142_1
61 years, female
88.4
495_1
57 years, female
80.4
32_1
67 years, male
75.6
415_1
77 years, female
75.1
89_1
63 years, male
63.7
466_1
57 years, female
63.6
414_1
84 years, female
57.4
43_1
64 years, female
51.1
501_1
88 years, male
48.7
149_1
88 years, male
38.4
413_1
59 years, female
28.2
491_1
89 years, female
25.1
490_1
67 years, female
23.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.