We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPS5
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RPS5
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Endocrine cells: Medium
Enterocytes: Medium
Enterocytes - Microvilli: Not detected
Goblet cells: Medium
Paneth cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:905.6 nTPM
HPA:557.7 nTPM
GTEx:905.6 nTPM
FANTOM5:544.4 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055878Antibody HPA061979
Endocrine cells Medium-
Enterocytes Medium-
Enterocytes - Microvilli Not detected-
Glandular cells -High
Goblet cells Medium-
Paneth cells Low-





SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 557.7
overview
Male, age 65
Small intestine sample 232
nTPM: 709.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 532.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 508.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 480.2

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 905.6
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 905.6
Samples: 187

Max nTPM: 2087.2
Min nTPM: 408.3
Std nTPM: 257.3
Median nTPM: 858.7
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 2087.2
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1645.9
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1587.0
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1584.3
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1506.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1505.3
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1461.5
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1456.6
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1407.2
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1350.6
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1347.4
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1343.9
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1336.9
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1332.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1322.6
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1292.2
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1264.1
GTEX-183FY-1626-SM-793D8 20-29 years, male 1253.4
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1251.4
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1241.6
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1229.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1181.9
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1176.7
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1176.0
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1160.1
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1158.4
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1157.5
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1155.4
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1154.8
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1149.4
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1139.8
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1129.8
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1128.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1118.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1106.8
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1085.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1084.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1081.4
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1080.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1072.3
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1070.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1069.4
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1069.2
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1051.5
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1051.5
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1049.1
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1047.8
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1047.4
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1033.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1032.6
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1027.1
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1025.3
GTEX-1192X-2526-SM-59868 50-59 years, male 1023.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1023.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1010.6
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1007.5
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1005.9
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 999.9
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 992.3
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 986.3
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 985.1
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 984.4
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 984.1
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 973.9
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 971.9
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 965.5
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 963.1
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 960.7
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 960.5
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 957.3
GTEX-117YX-0326-SM-5GICL 50-59 years, male 952.6
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 950.3
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 949.4
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 943.1
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 942.4
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 942.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 937.1
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 928.9
GTEX-1C475-1426-SM-793CH 40-49 years, female 924.7
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 921.1
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 918.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 909.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 909.0
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 896.4
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 894.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 883.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 883.4
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 882.9
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 875.8
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 869.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 869.1
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 863.8
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 862.0
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 858.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 857.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 856.6
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 853.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 851.2
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 846.0
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 842.7
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 840.5
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 839.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 838.9
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 837.0
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 835.4
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 827.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 827.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 826.2
GTEX-13113-1226-SM-5EGHT 60-69 years, female 826.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 824.0
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 818.3
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 816.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 808.2
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 803.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 802.4
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 802.4
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 801.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 799.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 798.0
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 789.1
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 786.7
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 784.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 780.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 778.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 778.0
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 776.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 771.8
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 769.7
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 765.9
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 763.3
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 757.9
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 756.2
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 754.7
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 752.7
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 745.1
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 738.9
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 735.5
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 732.7
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 731.4
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 729.7
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 722.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 720.0
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 718.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 715.3
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 715.0
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 712.6
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 710.6
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 707.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 707.7
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 705.4
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 701.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 699.2
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 697.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 693.1
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 692.6
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 689.8
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 687.5
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 685.5
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 671.5
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 668.6
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 653.6
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 650.0
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 645.3
GTEX-144GM-1026-SM-79OKU 20-29 years, male 631.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 623.1
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 617.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 612.4
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 606.9
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 599.5
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 595.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 578.1
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 573.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 565.4
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 564.7
GTEX-111YS-1426-SM-5GID8 60-69 years, male 562.0
GTEX-YFCO-1326-SM-664NV 40-49 years, male 561.7
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 560.5
GTEX-14PN3-2026-SM-68729 60-69 years, female 552.3
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 551.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 547.3
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 533.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 518.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 509.4
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 507.7
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 499.9
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 425.3
GTEX-ZTSS-0926-SM-59865 40-49 years, male 408.3
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 544.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 544.4
FF:10024-101D6 15,40,85 years, mixed 544.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.