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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1304.4 nTPM
GTEx:1304.4 nTPM
FANTOM5:1121.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA055878Antibody HPA061979
Squamous epithelial cells HighMedium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1304.4
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1304.4
Samples: 156

Max nTPM: 3191.1
Min nTPM: 644.1
Std nTPM: 404.9
Median nTPM: 1241.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 3191.1
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 2997.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 2772.4
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 2414.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2294.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2077.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 2061.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2025.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2022.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 2010.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1934.9
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 1890.3
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1861.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1783.9
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 1783.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1779.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 1775.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1738.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 1683.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1667.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1661.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 1657.6
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1641.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1639.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1624.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1603.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 1601.0
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1579.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 1578.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1577.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1571.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1559.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1541.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1540.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 1522.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1516.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1500.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1487.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 1469.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 1462.5
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1462.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1462.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 1454.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1449.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1444.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1441.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1441.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1419.9
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 1418.3
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1416.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1405.7
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1400.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 1397.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1395.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 1380.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1353.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1338.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1332.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 1330.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1326.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1301.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1286.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1286.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1286.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1285.8
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1285.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1278.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1273.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1272.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1271.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 1265.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1256.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 1252.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1250.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1247.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1244.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1242.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1242.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1240.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1231.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1230.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1223.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1220.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 1213.7
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1211.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 1209.3
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 1208.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1192.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1187.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1185.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1182.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1179.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1176.8
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 1168.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1163.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1162.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1154.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1122.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1121.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1115.7
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1109.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1103.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1097.4
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1086.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1086.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1081.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1072.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1067.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1048.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1047.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1047.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1043.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1042.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1040.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1036.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1034.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1033.3
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1030.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1020.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1014.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1013.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1011.4
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1009.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1005.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1000.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 994.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 993.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 992.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 991.7
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 988.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 978.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 973.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 960.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 956.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 956.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 946.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 923.0
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 901.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 900.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 895.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 893.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 886.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 885.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 863.8
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 849.7
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 847.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 835.9
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 835.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 811.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 805.3
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 775.9
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 766.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 744.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 723.4
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 679.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 644.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1121.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1121.4
FF:10204-103F6 68 years, female 1121.4

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