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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:162.2 nTPM
FANTOM5:283.1 Scaled Tags Per Million
Pig:96.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039319
Glial cells Medium
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 162.2
Samples: 246

Max nTPM: 229.9
Min nTPM: 89.7
Std nTPM: 22.8
Median nTPM: 162.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 229.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 227.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 220.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 218.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 217.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 214.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 214.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 211.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 206.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 205.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 205.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 202.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 201.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 199.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 199.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 199.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 195.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 195.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 193.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 192.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 192.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 192.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 192.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 191.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 190.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 188.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 188.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 187.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 187.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 187.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 186.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 186.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 185.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 185.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 185.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 183.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 183.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 182.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 181.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 181.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 180.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 180.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 180.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 179.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 179.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 178.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 178.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 178.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 177.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 177.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 176.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 176.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 176.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 176.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 176.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 176.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 176.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 176.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 176.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 176.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 175.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 175.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 175.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 174.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 174.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 174.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 174.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 174.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 174.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 173.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 173.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 172.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 172.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 172.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 172.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 172.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 172.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 172.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 171.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 171.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 171.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 171.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 171.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 171.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 170.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 170.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 170.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 169.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 169.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 169.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 169.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 168.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 168.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 168.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 168.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 168.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 168.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 168.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 167.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 167.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 167.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 167.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 167.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 166.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 166.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 166.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 166.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 166.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 165.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 165.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 165.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 164.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 164.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 164.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 163.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 163.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 163.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 163.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 163.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 163.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 162.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 162.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 162.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 162.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 162.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 162.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 161.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 161.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 161.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 160.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 160.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 159.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 159.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 159.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 159.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 158.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 158.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 158.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 158.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 158.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 158.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 158.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 157.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 157.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 157.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 157.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 157.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 157.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 157.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 156.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 156.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 156.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 156.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 156.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 156.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 155.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 155.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 155.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 154.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 154.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 154.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 154.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 153.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 153.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 153.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 153.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 153.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 153.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 152.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 152.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 152.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 151.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 151.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 151.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 151.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 150.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 150.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 149.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 149.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 149.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 149.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 148.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 148.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 148.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 146.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 146.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 146.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 146.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 145.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 144.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 144.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 144.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 144.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 143.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 143.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 143.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 143.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 142.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 142.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 141.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 141.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 140.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 140.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 140.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 140.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 139.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 139.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 139.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 139.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 139.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 138.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 138.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 138.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 137.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 137.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 137.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 136.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 136.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 136.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 135.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 135.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 135.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 135.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 135.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 134.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 133.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 132.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 132.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 131.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 130.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 129.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 126.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 124.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 122.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 122.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 121.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 119.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 117.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 115.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 115.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 110.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 99.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 92.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 89.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 283.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 283.1
FF:10164-103B2 76 years, female 283.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 96.2
Pig sample Sample description nTPM
Caudate
nTPM: 96.2
Samples: 4

Max nTPM: 112.4
Min nTPM: 82.1
Sample A Female 82.1
Sample B Female 94.1
Sample C Male 112.4
Sample D Male 96.3

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