HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:4519.6 nTPM
HPA:4519.6 nTPM
GTEx:2690.9 nTPM
FANTOM5:851.4 Scaled Tags Per Million
Pig:2676.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004011Antibody CAB017779
Glial cells HighHigh
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4519.6
Sample id Sample description nTPM
Hippocampus
nTPM: 4519.6
2529 Female, age 94, left hemisphere 4696.4
1898 Male, age 80, left hemisphere 4562.7
2148 Female, age 91, left hemisphere 4541.9
1911 Female, age 85, right hemisphere 4530.8
1855 Male, age 76, left hemisphere 4395.8
2621 Female, age 67, right hemisphere 4389.7
Dentate gyrus
nTPM: 4409.8
2528 Male, age 74, both hemispheres 4632.6
2010 Male, age 76, both hemispheres 4449.7
2246 Female, age 85, both hemispheres 4438.4
1927 Female, age 91, both hemispheres 4349.8
2530 Female, age 94, left hemisphere 4347.2
2531 Female, age 67, both hemispheres 4240.8
Entorhinal gyrus
nTPM: 4500.0
2117 Female, age 91, right hemisphere 4685.2
1938 Female, age 85, left hemisphere 4658.0
2686 Male, age 75, right hemisphere 4505.9
2764 Male, age 80, right hemisphere 4462.2
1787 Male, age 76, left hemisphere 4430.7
2613 Female, age 94, left hemisphere 4257.6
Hippocampus, CA1
nTPM: 4488.5
2527 Male, age 74, both hemispheres 4759.2
2749 Male, age 80, left hemisphere 4538.9
2082 Female, age 91, right hemisphere 4405.8
1873 Female, age 85, both hemispheres 4403.4
2045 Male, age 76, both hemispheres 4335.3
Hippocampus, CA2
nTPM: 4437.9
2249 Male, age 74, both hemispheres 4625.8
1940 Female, age 85, left hemisphere 4460.5
1963 Male, age 80, left hemisphere 4458.0
2113 Female, age 91, right hemisphere 4456.7
2437 Female, age 94, left hemisphere 4326.3
1892 Male, age 76, both hemispheres 4299.9
Hippocampus, CA3
nTPM: 4430.3
1891 Female, age 85, both hemispheres 4503.6
2137 Male, age 80, left hemisphere 4492.2
2436 Male, age 74, both hemispheres 4486.7
2861 Female, age 67, both hemispheres 4393.4
1867 Male, age 76, both hemispheres 4388.6
2620 Female, age 94, left hemisphere 4317.1
Parahippocampal cortex
nTPM: 4500.3
1933 Female, age 85, both hemispheres 4681.7
2250 Female, age 67, right hemisphere 4629.2
2692 Male, age 74, both hemispheres 4614.0
2622 Female, age 67, right hemisphere 4524.8
2018 Male, age 76, both hemispheres 4495.5
1850 Male, age 80, both hemispheres 4452.4
1990 Female, age 91, right hemisphere 4444.6
2245 Female, age 91, both hemispheres 4444.6
2532 Female, age 72, left hemisphere 4407.6
2693 Female, age 94, both hemispheres 4308.6
Perirhinal gyrus
nTPM: 4417.0
1794 Male, age 80, right hemisphere 4579.4
1847 Female, age 91, left hemisphere 4463.8
1841 Female, age 85, right hemisphere 4459.7
2521 Female, age 94, right hemisphere 4357.1
2848 Male, age 76, right hemisphere 4225.0
Subiculum
nTPM: 4456.1
2619 Male, age 74, both hemispheres 4649.7
1977 Female, age 85, both hemispheres 4518.2
2729 Female, age 91, right hemisphere 4512.8
1901 Male, age 80, both hemispheres 4421.3
2042 Male, age 76, both hemispheres 4397.3
2438 Female, age 94, left hemisphere 4237.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2690.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2690.9
Samples: 197

Max nTPM: 7944.4
Min nTPM: 690.6
Std nTPM: 1240.6
Median nTPM: 2456.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7944.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 7300.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 7190.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 6262.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 6160.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 6153.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 5835.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 5483.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 5338.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 5085.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 4937.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 851.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 851.4
FF:10153-102I9 76 years, female 883.5
FF:10169-103B7 60 years, female 819.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2676.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2676.8
Samples: 4

Max nTPM: 4013.4
Min nTPM: 1925.9
Sample A Female 4013.4
Sample B Female 1925.9
Sample C Male 2689.0
Sample D Male 2078.9
Entorhinal cortex
nTPM: 2665.4
Samples: 4

Max nTPM: 3328.0
Min nTPM: 1721.4
Sample A Female 2673.0
Sample B Female 2939.2
Sample C Male 3328.0
Sample D Male 1721.4
Subiculum
nTPM: 2332.7
Samples: 4

Max nTPM: 3529.4
Min nTPM: 1842.4
Sample A Female 3529.4
Sample B Female 1961.5
Sample C Male 1842.4
Sample D Male 1997.4
Ventral hippocampus
nTPM: 2409.2
Samples: 4

Max nTPM: 3004.0
Min nTPM: 1826.1
Sample A Female 2666.0
Sample B Female 1826.1
Sample C Male 3004.0
Sample D Male 2140.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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