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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:4417.7 nTPM
HPA:4417.7 nTPM
FANTOM5:407.3 Scaled Tags Per Million
Pig:1912.8 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 4417.7
Sample id Sample description nTPM
Area postrema
nTPM: 4239.5
2799 Male, age 61, both hemispheres 4295.9
2306 Male, age 80, both hemispheres 4229.1
2054 Male, age 76, both hemispheres 4193.6
Cuneate nuclei
nTPM: 4270.2
2131 Male, age 76, both hemispheres 4304.7
2376 Male, age 61, both hemispheres 4282.9
2381 Male, age 80, both hemispheres 4223.1
Dorsal medullary reticular nucleus
nTPM: 4292.1
2088 Male, age 76, both hemispheres 4307.6
2040 Female, age 85, both hemispheres 4291.4
2373 Male, age 61, both hemispheres 4277.4
Dorsal motor vagal complex
nTPM: 4275.1
2000 Male, age 74, unknown 4404.8
2797 Male, age 61, both hemispheres 4404.4
2844 Male, age 55, unknown 4373.9
2133 Female, age 91, both hemispheres 4293.1
2185 Male, age 76, both hemispheres 4288.9
2643 Male, age 74, both hemispheres 4235.4
2813 Female, age 72, unknown 4149.6
2807 Female, age 85, both hemispheres 4051.0
Gigantocellular reticular nuclei, medullary
nTPM: 4321.4
2022 Male, age 76, right hemisphere 4458.0
1876 Female, age 85, both hemispheres 4372.2
2314 Male, age 61, both hemispheres 4356.1
2387 Female, age 91, both hemispheres 4313.0
2462 Male, age 74, both hemispheres 4217.5
2310 Male, age 80, both hemispheres 4211.8
Gigantocellular reticular nuclei, pars
nTPM: 4282.5
2084 Female, age 85, both hemispheres 4435.3
2168 Male, age 76, both hemispheres 4307.0
2336 Male, age 61, both hemispheres 4273.5
2706 Male, age 80, both hemispheres 4202.3
2330 Male, age 80, both hemispheres 4194.5
Inferior olive
nTPM: 4417.7
2563 Male, age 74, both hemispheres 4655.4
2085 Female, age 85, both hemispheres 4524.5
2379 Male, age 80, both hemispheres 4327.3
2178 Male, age 61, both hemispheres 4321.3
2628 Female, age 91, both hemispheres 4260.1
Lateral medullary reticular nucleus
nTPM: 4309.0
2804 Female, age 91, both hemispheres 4366.3
2044 Male, age 76, both hemispheres 4356.0
2852 Male, age 80, both hemispheres 4318.2
2305 Male, age 74, both hemispheres 4306.6
2190 Female, age 85, both hemispheres 4272.8
2374 Male, age 61, both hemispheres 4234.5
Medial vestibular nucleus
nTPM: 4364.7
2093 Male, age 80, both hemispheres 4443.4
2803 Female, age 91, both hemispheres 4411.5
2743 Female, age 85, both hemispheres 4352.0
2134 Male, age 76, both hemispheres 4334.0
2624 Male, age 61, both hemispheres 4324.2
2801 Male, age 74, both hemispheres 4322.9
Motor hypoglossal nucleus
nTPM: 4195.6
2125 Female, age 91, both hemispheres 4387.9
2132 Female, age 85, both hemispheres 4217.7
2277 Male, age 76, both hemispheres 4177.6
2182 Male, age 80, both hemispheres 4113.5
2461 Male, age 61, both hemispheres 4081.5
Nucleus ambiguus
nTPM: 4401.9
2071 Male, age 76, both hemispheres 4502.0
2096 Female, age 85, both hemispheres 4301.7
Nucleus cuneatus
nTPM: 4296.4
2564 Male, age 74, both hemispheres 4434.2
2562 Male, age 61, both hemispheres 4351.0
2100 Male, age 76, both hemispheres 4306.9
2805 Female, age 91, both hemispheres 4249.7
2380 Male, age 80, both hemispheres 4223.3
2808 Female, age 85, both hemispheres 4213.3
Nucleus gracilis
nTPM: 4198.4
2627 Male, age 74, both hemispheres 4265.6
2299 Female, age 85, both hemispheres 4166.4
2382 Male, age 80, both hemispheres 4163.4
Nucleus raphe magnus
nTPM: 4269.9
2160 Male, age 61, both hemispheres 4330.3
2455 Male, age 74, both hemispheres 4316.6
2051 Male, age 76, both hemispheres 4301.7
2328 Male, age 80, both hemispheres 4264.6
2459 Female, age 91, both hemispheres 4243.3
2172 Female, age 85, both hemispheres 4162.8
Nucleus raphe obscurus
nTPM: 4342.4
2142 Male, age 76, midline 4396.2
2845 Female, age 85, midline 4332.9
2800 Male, age 61, midline 4298.0
Nucleus raphe pallidus
nTPM: 4221.0
2145 Male, age 76, midline 4285.8
2183 Male, age 80, midline 4243.5
1924 Male, age 61, midline 4133.7
Nucleus tractus solitarii
nTPM: 4160.7
2656 Male, age 76, both hemispheres 4284.7
2144 Female, age 91, right hemisphere 4208.5
2191 Female, age 85, both hemispheres 4107.1
2307 Male, age 80, both hemispheres 4042.7
Parvicellular reticular nuclei
nTPM: 4355.0
2095 Male, age 76, both hemispheres 4450.4
2119 Male, age 80, both hemispheres 4439.3
2558 Male, age 74, both hemispheres 4175.1
Parvicellular reticular nuclei, medullary
nTPM: 4321.8
2091 Female, age 85, both hemispheres 4356.2
2181 Male, age 80, left hemisphere 4305.7
2189 Female, age 91, both hemispheres 4303.5
Peritrigeminal nucleus
nTPM: 4382.1
2136 Male, age 76, both hemispheres 4453.4
2067 Female, age 85, both hemispheres 4434.5
2179 Male, age 61, both hemispheres 4258.4
Prepositus hypoglossal nucleus
nTPM: 4306.8
2855 Female, age 85, right hemisphere 4347.9
2086 Male, age 80, both hemispheres 4265.7
Spinal trigeminal nucleus, caudal
nTPM: 4279.9
2447 Male, age 76, both hemispheres 4363.3
2312 Male, age 61, both hemispheres 4278.3
2390 Female, age 91, both hemispheres 4270.0
2308 Male, age 80, both hemispheres 4244.0
2642 Male, age 74, both hemispheres 4244.0
Spinal trigeminal nucleus, interpolar
nTPM: 4336.5
2066 Male, age 76, right hemisphere 4451.2
2625 Male, age 61, both hemispheres 4446.7
2389 Female, age 91, both hemispheres 4288.1
2033 Male, age 80, both hemispheres 4284.5
2386 Female, age 85, both hemispheres 4211.8
Spinal vestibular nucleus
nTPM: 4364.7
2748 Male, age 76, both hemispheres 4446.0
2186 Female, age 91, both hemispheres 4364.0
2384 Male, age 74, both hemispheres 4363.3
2806 Female, age 85, both hemispheres 4353.2
2796 Male, age 61, both hemispheres 4332.1
2780 Male, age 80, both hemispheres 4329.5
Ventral medullary reticular nucleus
nTPM: 4333.2
2060 Male, age 76, both hemispheres 4339.0
2372 Male, age 61, both hemispheres 4327.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 4322.1
1986 Male, age 76, both hemispheres 4417.3
2302 Female, age 91, both hemispheres 4372.6
2180 Male, age 61, both hemispheres 4276.8
2741 Female, age 85, both hemispheres 4274.3
2118 Male, age 80, both hemispheres 4269.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 407.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 407.3
FF:10174-103C3 60 years, female 433.3
FF:10038-101F2 18-64 years, mixed 396.7
FF:10155-103A2 76 years, female 391.7

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1912.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1912.8
Samples: 4

Max nTPM: 2223.3
Min nTPM: 1490.6
Sample A Female 1490.6
Sample B Female 1961.8
Sample C Male 2223.3
Sample D Male 1975.4

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