PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1963.4 nTPM
HPA:1963.4 nTPM
FANTOM5:1947.6 Scaled Tags Per Million
Pig:1257.3 nTPM
Mouse:2454.2 nTPM
Allen mouse:5.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 1963.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1407.9
2301 Female, age 85, both hemispheres 1453.0
2090 Male, age 80, both hemispheres 1422.5
1984 Male, age 76, both hemispheres 1392.4
2188 Female, age 91, both hemispheres 1363.5
Area postrema
nTPM: 1286.8
2054 Male, age 76, both hemispheres 1438.7
2799 Male, age 61, both hemispheres 1216.2
2306 Male, age 80, both hemispheres 1205.5
Cuneate nuclei
nTPM: 1402.5
2131 Male, age 76, both hemispheres 1491.3
2376 Male, age 61, both hemispheres 1392.2
2381 Male, age 80, both hemispheres 1324.1
Dorsal cochlear nucleus
nTPM: 1441.1
2058 Male, age 76, both hemispheres 1530.9
2187 Female, age 91, both hemispheres 1506.6
2370 Male, age 61, both hemispheres 1482.4
2802 Male, age 74, right hemisphere 1371.9
2378 Male, age 80, both hemispheres 1313.5
Dorsal medullary reticular nucleus
nTPM: 1614.1
2040 Female, age 85, both hemispheres 1882.2
2088 Male, age 76, both hemispheres 1493.4
2373 Male, age 61, both hemispheres 1466.7
Dorsal motor vagal complex
nTPM: 1547.4
2133 Female, age 91, both hemispheres 1825.8
2000 Male, age 74, unknown 1719.9
2813 Female, age 72, unknown 1686.9
2844 Male, age 55, unknown 1682.7
2643 Male, age 74, both hemispheres 1439.7
2797 Male, age 61, both hemispheres 1378.3
2185 Male, age 76, both hemispheres 1325.4
2807 Female, age 85, both hemispheres 1320.5
Dorsal tegmental nucleus
nTPM: 1537.4
2083 Male, age 80, both hemispheres 1675.8
2358 Male, age 61, both hemispheres 1548.0
1936 Male, age 76, left hemisphere 1465.5
2326 Male, age 74, both hemispheres 1460.5
Dorsolateral tegmental area
nTPM: 1534.3
2141 Male, age 76, both hemispheres 1663.9
2654 Male, age 80, both hemispheres 1638.1
2751 Female, age 85, both hemispheres 1534.7
2360 Male, age 74, both hemispheres 1463.4
2337 Male, age 61, both hemispheres 1371.3
Gigantocellular reticular nuclei, medullary
nTPM: 1518.1
1876 Female, age 85, both hemispheres 1726.7
2022 Male, age 76, right hemisphere 1688.1
2462 Male, age 74, both hemispheres 1535.5
2310 Male, age 80, both hemispheres 1463.2
2387 Female, age 91, both hemispheres 1361.5
2314 Male, age 61, both hemispheres 1333.9
Gigantocellular reticular nuclei, pars
nTPM: 1587.6
2084 Female, age 85, both hemispheres 1855.2
2168 Male, age 76, both hemispheres 1739.4
2336 Male, age 61, both hemispheres 1647.0
2330 Male, age 80, both hemispheres 1349.8
2706 Male, age 80, both hemispheres 1346.6
Inferior olive
nTPM: 1334.9
2563 Male, age 74, both hemispheres 1460.6
2085 Female, age 85, both hemispheres 1375.7
2628 Female, age 91, both hemispheres 1329.3
2178 Male, age 61, both hemispheres 1278.3
2379 Male, age 80, both hemispheres 1230.6
Kolliker-Fuse nucleus
nTPM: 1452.1
2163 Male, age 80, both hemispheres 1629.3
2793 Female, age 91, left hemisphere 1393.0
2315 Male, age 76, right hemisphere 1334.1
Lateral lemniscal nuclei
nTPM: 1594.8
2036 Male, age 80, both hemispheres 1752.0
2169 Male, age 76, both hemispheres 1736.8
2746 Female, age 85, left hemisphere 1673.1
2453 Male, age 74, right hemisphere 1462.6
2320 Female, age 91, left hemisphere 1349.4
Lateral medullary reticular nucleus
nTPM: 1446.7
2044 Male, age 76, both hemispheres 1644.4
2305 Male, age 74, both hemispheres 1486.0
2190 Female, age 85, both hemispheres 1465.5
2374 Male, age 61, both hemispheres 1390.9
2852 Male, age 80, both hemispheres 1360.2
2804 Female, age 91, both hemispheres 1333.2
Lateral parabrachial nucleus
nTPM: 1498.4
2139 Female, age 85, right hemisphere 1801.1
2013 Male, age 80, both hemispheres 1492.1
2790 Male, age 61, both hemispheres 1477.5
2792 Male, age 76, both hemispheres 1222.9
Lateral vestibular nucleus
nTPM: 1512.8
2184 Male, age 76, both hemispheres 1535.4
2311 Male, age 80, both hemispheres 1490.2
Locus coeruleus
nTPM: 1963.4
2123 Female, age 91, both hemispheres 2437.8
2720 Male, age 74, both hemispheres 2035.3
2014 Male, age 55, unknown 1977.3
1980 Male, age 76, both hemispheres 1923.5
2317 Female, age 72, unknown 1868.5
2162 Male, age 80, both hemispheres 1773.3
2788 Male, age 74, unknown 1728.0
Medial olivary nucleus
nTPM: 1289.0
2138 Female, age 91, both hemispheres 1356.3
2851 Male, age 80, both hemispheres 1333.4
1962 Male, age 76, both hemispheres 1239.3
1943 Male, age 61, both hemispheres 1227.1
Medial parabrachial nucleus
nTPM: 1556.2
2156 Male, age 61, both hemispheres 1630.8
2170 Female, age 91, both hemispheres 1617.2
2854 Male, age 80, both hemispheres 1582.3
2786 Male, age 76, both hemispheres 1521.2
2463 Female, age 85, right hemisphere 1429.4
Medial periolivary nuclei
nTPM: 1524.6
2171 Female, age 85, both hemispheres 1855.2
2063 Male, age 76, both hemispheres 1710.0
2791 Male, age 74, right hemisphere 1421.9
2081 Male, age 80, both hemispheres 1348.2
2458 Female, age 91, both hemispheres 1287.8
Medial vestibular nucleus
nTPM: 1640.0
2093 Male, age 80, both hemispheres 1751.1
2803 Female, age 91, both hemispheres 1699.1
2134 Male, age 76, both hemispheres 1628.0
2743 Female, age 85, both hemispheres 1627.8
2624 Male, age 61, both hemispheres 1595.0
2801 Male, age 74, both hemispheres 1539.1
Motor facial nucleus
nTPM: 1539.7
2062 Male, age 76, both hemispheres 1815.4
2697 Female, age 85, both hemispheres 1573.8
2365 Male, age 74, right hemisphere 1526.2
2126 Male, age 61, both hemispheres 1488.1
2327 Male, age 80, both hemispheres 1483.9
2795 Female, age 91, both hemispheres 1351.0
Motor hypoglossal nucleus
nTPM: 1686.5
2132 Female, age 85, both hemispheres 1824.9
2461 Male, age 61, both hemispheres 1808.1
2125 Female, age 91, both hemispheres 1723.6
2182 Male, age 80, both hemispheres 1560.1
2277 Male, age 76, both hemispheres 1516.0
Motor trigeminal nucleus
nTPM: 1515.7
2079 Male, age 80, both hemispheres 1617.1
2335 Male, age 61, both hemispheres 1612.7
2309 Male, age 76, both hemispheres 1545.4
2560 Male, age 74, both hemispheres 1405.6
2321 Female, age 91, both hemispheres 1397.4
Nuclei of the trapezoid body
nTPM: 1643.1
2735 Female, age 85, both hemispheres 1895.4
1983 Male, age 76, both hemispheres 1785.8
2159 Male, age 61, both hemispheres 1766.8
2166 Male, age 80, both hemispheres 1468.8
2368 Female, age 91, both hemispheres 1298.5
Nucleus ambiguus
nTPM: 1666.6
2096 Female, age 85, both hemispheres 2066.7
2071 Male, age 76, both hemispheres 1266.4
Nucleus cuneatus
nTPM: 1366.0
2562 Male, age 61, both hemispheres 1574.3
2564 Male, age 74, both hemispheres 1452.9
2100 Male, age 76, both hemispheres 1424.7
2805 Female, age 91, both hemispheres 1304.3
2808 Female, age 85, both hemispheres 1231.4
2380 Male, age 80, both hemispheres 1208.2
Nucleus gracilis
nTPM: 1268.8
2627 Male, age 74, both hemispheres 1417.9
2382 Male, age 80, both hemispheres 1212.4
2299 Female, age 85, both hemispheres 1176.2
Nucleus raphe magnus
nTPM: 1649.4
2172 Female, age 85, both hemispheres 1948.4
2160 Male, age 61, both hemispheres 1908.0
2455 Male, age 74, both hemispheres 1692.1
2051 Male, age 76, both hemispheres 1514.9
2328 Male, age 80, both hemispheres 1508.9
2459 Female, age 91, both hemispheres 1324.1
Nucleus raphe obscurus
nTPM: 1306.6
2800 Male, age 61, midline 1389.0
2845 Female, age 85, midline 1361.9
2142 Male, age 76, midline 1168.7
Nucleus raphe pallidus
nTPM: 1416.5
2183 Male, age 80, midline 1724.9
1924 Male, age 61, midline 1342.1
2145 Male, age 76, midline 1182.6
Nucleus tractus solitarii
nTPM: 1509.5
2656 Male, age 76, both hemispheres 1761.5
2307 Male, age 80, both hemispheres 1508.3
2144 Female, age 91, right hemisphere 1426.5
2191 Female, age 85, both hemispheres 1341.7
Paramedian reticular nucleus
nTPM: 1711.0
2313 Male, age 61, both hemispheres 1843.5
2050 Female, age 85, both hemispheres 1820.5
2057 Male, age 80, both hemispheres 1770.6
2052 Male, age 76, both hemispheres 1409.4
Parvicellular reticular nuclei
nTPM: 1528.6
2119 Male, age 80, both hemispheres 1654.3
2095 Male, age 76, both hemispheres 1508.6
2558 Male, age 74, both hemispheres 1422.9
Parvicellular reticular nuclei, medullary
nTPM: 1710.5
2189 Female, age 91, both hemispheres 1840.3
2181 Male, age 80, left hemisphere 1660.0
2091 Female, age 85, both hemispheres 1631.1
Peritrigeminal nucleus
nTPM: 1559.7
2179 Male, age 61, both hemispheres 1600.3
2067 Female, age 85, both hemispheres 1598.5
2136 Male, age 76, both hemispheres 1480.2
Pontine nuclei
nTPM: 1677.7
2787 Female, age 85, both hemispheres 2225.8
1863 Male, age 55, unknown 1843.1
2727 Male, age 61, right hemisphere 1774.4
1968 Male, age 76, left hemisphere 1677.2
2109 Female, age 72, unknown 1670.2
2115 Male, age 80, left hemisphere 1438.3
2454 Male, age 74, left hemisphere 1420.3
2319 Female, age 91, both hemispheres 1372.0
Pontine raphe nucleus
nTPM: 1762.9
2122 Female, age 85, midline 1871.3
2853 Male, age 76, midline 1654.5
Posteroventral cochlear nucleus
nTPM: 1482.0
2752 Female, age 85, both hemispheres 1785.7
2070 Male, age 76, both hemispheres 1591.1
2371 Male, age 61, both hemispheres 1474.0
2135 Female, age 91, both hemispheres 1281.4
2341 Male, age 80, both hemispheres 1277.7
Prepositus hypoglossal nucleus
nTPM: 1534.1
2855 Female, age 85, right hemisphere 1568.3
2086 Male, age 80, both hemispheres 1499.9
Principal sensory trigeminal nucleus
nTPM: 1572.4
2158 Male, age 61, both hemispheres 1796.9
2008 Male, age 80, left hemisphere 1666.0
2324 Male, age 76, both hemispheres 1481.9
2367 Female, age 91, left hemisphere 1344.7
Reticular pontine nucleus, caudal
nTPM: 1453.1
2092 Male, age 76, both hemispheres 1561.0
2332 Male, age 80, right hemisphere 1522.6
2559 Male, age 74, both hemispheres 1446.8
2457 Female, age 91, both hemispheres 1282.1
Reticular pontine nucleus, oral
nTPM: 1515.1
2012 Female, age 85, both hemispheres 1691.6
1939 Male, age 80, both hemispheres 1576.5
2167 Male, age 76, both hemispheres 1563.5
2361 Male, age 74, both hemispheres 1424.1
2366 Female, age 91, both hemispheres 1319.7
Reticulotegmental nucleus
nTPM: 1535.6
2325 Male, age 76, both hemispheres 1635.7
2333 Male, age 80, both hemispheres 1537.1
2452 Male, age 74, both hemispheres 1528.4
2322 Female, age 91, both hemispheres 1441.2
Spinal trigeminal nucleus, caudal
nTPM: 1532.4
2390 Female, age 91, both hemispheres 1708.3
2447 Male, age 76, both hemispheres 1550.0
2308 Male, age 80, both hemispheres 1489.0
2312 Male, age 61, both hemispheres 1471.5
2642 Male, age 74, both hemispheres 1443.3
Spinal trigeminal nucleus, interpolar
nTPM: 1698.5
2066 Male, age 76, right hemisphere 1837.2
2033 Male, age 80, both hemispheres 1782.0
2625 Male, age 61, both hemispheres 1690.4
2386 Female, age 85, both hemispheres 1665.4
2389 Female, age 91, both hemispheres 1517.5
Spinal trigeminal nucleus, oral
nTPM: 1551.2
2737 Female, age 85, both hemispheres 1612.7
1978 Male, age 76, both hemispheres 1576.5
2164 Male, age 80, both hemispheres 1464.5
Spinal vestibular nucleus
nTPM: 1650.1
2186 Female, age 91, both hemispheres 1825.7
2780 Male, age 80, both hemispheres 1802.5
2806 Female, age 85, both hemispheres 1638.1
2796 Male, age 61, both hemispheres 1623.7
2748 Male, age 76, both hemispheres 1572.2
2384 Male, age 74, both hemispheres 1438.6
Subcoeruleus area
nTPM: 1596.4
2323 Female, age 91, left hemisphere 1887.8
1958 Male, age 80, both hemispheres 1676.9
2089 Male, age 76, left hemisphere 1528.2
2451 Male, age 74, both hemispheres 1503.4
2369 Female, age 85, left hemisphere 1385.9
Superior olive
nTPM: 1530.3
1875 Female, age 85, both hemispheres 1824.8
2020 Male, age 76, both hemispheres 1519.1
2364 Male, age 74, right hemisphere 1505.5
2329 Male, age 80, right hemisphere 1455.9
2561 Female, age 91, both hemispheres 1346.0
Superior vestibular nucleus
nTPM: 1498.4
2015 Male, age 80, both hemispheres 1581.8
2061 Male, age 76, both hemispheres 1462.3
2383 Male, age 74, both hemispheres 1451.1
Ventral medullary reticular nucleus
nTPM: 1495.0
2060 Male, age 76, both hemispheres 1627.0
2372 Male, age 61, both hemispheres 1363.0
Ventral periolivary nuclei
nTPM: 1583.5
2130 Female, age 85, both hemispheres 1888.4
2165 Male, age 80, both hemispheres 1621.6
2023 Male, age 76, both hemispheres 1469.8
2794 Female, age 91, left hemisphere 1354.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 1492.5
2741 Female, age 85, both hemispheres 1661.7
1986 Male, age 76, both hemispheres 1577.2
2180 Male, age 61, both hemispheres 1513.4
2302 Female, age 91, both hemispheres 1378.1
2118 Male, age 80, both hemispheres 1332.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 1486.9
2840 Female, age 85, both hemispheres 1605.1
1959 Male, age 76, both hemispheres 1564.2
2449 Male, age 74, both hemispheres 1523.8
2359 Male, age 61, both hemispheres 1510.1
2161 Male, age 80, both hemispheres 1434.9
2456 Female, age 91, both hemispheres 1283.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 1947.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1947.6
FF:10182-103D2 60 years, female 2242.3
FF:10165-103B3 76 years, female 1652.9
Medulla oblongata
Scaled Tags Per Million: 1085.4
FF:10038-101F2 18-64 years, mixed 1248.0
FF:10155-103A2 76 years, female 1109.6
FF:10174-103C3 60 years, female 898.5
Pons
Scaled Tags Per Million: 1692.5
FF:10033-101E6 18-54 years, mixed 1692.5

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 1257.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1145.3
Samples: 4

Max nTPM: 1312.7
Min nTPM: 991.7
Sample A Female 1312.7
Sample B Female 1084.2
Sample C Male 1192.6
Sample D Male 991.7
Pons
nTPM: 1257.3
Samples: 4

Max nTPM: 1384.6
Min nTPM: 1093.5
Sample A Female 1384.6
Sample B Female 1198.8
Sample C Male 1352.2
Sample D Male 1093.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 2454.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2454.2
Samples: 4

Max nTPM: 2527.5
Min nTPM: 2407.3
Sample A Male 2407.3
Sample B Male 2436.9
Sample C Female 2527.5
Sample D Female 2445.0

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.5
509 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 16.6
510 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 11.3
70230813 Antisense, RP_050524_04_E07, Mouse strain C57BL/6J (56 days, male) 0.0
511 Sense, RPS_Baylor_36998, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 5.1
509 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 15.3
510 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 11.3
511 Sense, RPS_Baylor_36998, Mouse strain C57BL/6J (56 days, male) 0.1
70230813 Antisense, RP_050524_04_E07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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