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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:256.5 nTPM
FANTOM5:603.3 Scaled Tags Per Million
Pig:550.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018122Antibody HPA027478Antibody HPA028386Antibody CAB010337
Glial cells Not detectedNot detectedNot detectedHigh
Neuronal cells Not detectedLowMediumNot detected









CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 256.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 256.5
Samples: 246

Max nTPM: 872.5
Min nTPM: 138.4
Std nTPM: 70.7
Median nTPM: 246.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 872.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 722.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 468.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 433.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 410.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 400.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 382.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 378.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 357.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 356.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 348.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 348.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 347.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 338.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 338.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 336.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 336.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 335.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 334.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 329.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 327.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 325.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 321.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 321.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 320.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 320.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 319.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 318.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 318.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 317.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 316.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 309.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 307.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 306.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 305.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 304.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 304.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 303.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 303.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 301.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 297.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 295.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 295.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 294.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 293.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 293.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 293.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 290.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 290.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 288.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 288.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 288.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 287.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 287.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 286.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 285.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 285.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 283.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 281.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 281.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 281.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 279.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 279.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 278.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 278.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 278.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 278.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 278.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 275.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 275.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 273.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 273.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 273.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 273.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 273.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 272.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 272.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 270.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 270.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 269.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 269.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 269.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 269.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 267.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 267.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 266.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 266.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 266.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 265.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 265.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 263.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 263.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 262.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 261.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 261.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 261.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 261.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 261.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 261.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 260.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 260.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 259.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 259.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 259.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 256.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 255.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 255.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 254.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 254.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 253.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 253.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 253.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 251.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 251.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 250.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 250.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 250.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 250.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 250.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 250.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 248.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 246.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 246.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 245.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 244.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 244.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 244.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 244.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 244.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 243.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 242.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 240.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 240.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 239.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 239.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 239.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 238.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 238.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 237.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 237.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 236.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 236.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 236.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 236.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 235.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 235.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 235.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 235.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 233.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 232.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 232.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 232.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 231.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 231.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 231.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 230.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 230.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 230.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 229.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 228.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 228.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 227.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 227.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 227.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 226.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 226.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 226.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 225.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 225.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 225.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 224.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 224.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 223.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 223.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 223.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 222.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 222.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 222.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 222.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 221.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 219.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 219.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 218.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 218.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 218.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 217.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 217.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 216.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 216.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 216.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 216.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 214.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 214.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 212.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 212.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 212.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 211.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 211.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 210.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 209.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 209.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 208.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 208.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 206.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 206.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 205.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 205.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 205.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 204.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 204.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 203.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 203.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 201.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 200.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 198.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 198.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 198.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 197.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 196.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 196.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 195.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 191.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 190.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 190.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 189.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 188.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 187.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 187.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 187.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 184.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 184.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 183.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 179.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 178.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 178.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 176.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 176.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 174.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 173.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 172.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 172.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 172.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 164.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 145.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 143.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 138.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 603.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 603.3
FF:10164-103B2 76 years, female 603.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 550.8
Pig sample Sample description nTPM
Caudate
nTPM: 550.8
Samples: 4

Max nTPM: 603.1
Min nTPM: 475.8
Sample A Female 567.5
Sample B Female 603.1
Sample C Male 556.7
Sample D Male 475.8

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