HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:88.2 nTPM
HPA:88.2 nTPM
GTEx:93.9 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Pig:2.0 nTPM
Mouse:32.3 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009078
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.2
Sample id Sample description nTPM
Hippocampus
nTPM: 85.1
1898 Male, age 80, left hemisphere 91.5
1855 Male, age 76, left hemisphere 87.2
1911 Female, age 85, right hemisphere 86.1
2621 Female, age 67, right hemisphere 84.4
2529 Female, age 94, left hemisphere 81.7
2148 Female, age 91, left hemisphere 79.6
Dentate gyrus
nTPM: 84.7
2530 Female, age 94, left hemisphere 89.1
2010 Male, age 76, both hemispheres 87.8
2528 Male, age 74, both hemispheres 85.4
1927 Female, age 91, both hemispheres 85.2
2246 Female, age 85, both hemispheres 84.0
2531 Female, age 67, both hemispheres 76.5
Entorhinal gyrus
nTPM: 83.5
1938 Female, age 85, left hemisphere 87.0
2764 Male, age 80, right hemisphere 86.7
2117 Female, age 91, right hemisphere 84.1
1787 Male, age 76, left hemisphere 82.7
2613 Female, age 94, left hemisphere 82.3
2686 Male, age 75, right hemisphere 78.0
Hippocampus, CA1
nTPM: 85.6
2749 Male, age 80, left hemisphere 90.9
1873 Female, age 85, both hemispheres 87.6
2527 Male, age 74, both hemispheres 84.9
2045 Male, age 76, both hemispheres 83.9
2082 Female, age 91, right hemisphere 80.9
Hippocampus, CA2
nTPM: 87.2
2249 Male, age 74, both hemispheres 90.3
1892 Male, age 76, both hemispheres 89.8
1963 Male, age 80, left hemisphere 88.7
2437 Female, age 94, left hemisphere 86.4
1940 Female, age 85, left hemisphere 84.3
2113 Female, age 91, right hemisphere 83.5
Hippocampus, CA3
nTPM: 84.8
2436 Male, age 74, both hemispheres 93.8
1891 Female, age 85, both hemispheres 88.2
2137 Male, age 80, left hemisphere 86.7
1867 Male, age 76, both hemispheres 85.0
2620 Female, age 94, left hemisphere 81.3
2861 Female, age 67, both hemispheres 74.0
Parahippocampal cortex
nTPM: 83.4
1850 Male, age 80, both hemispheres 90.5
1990 Female, age 91, right hemisphere 85.7
2692 Male, age 74, both hemispheres 84.5
1933 Female, age 85, both hemispheres 84.3
2018 Male, age 76, both hemispheres 84.1
2532 Female, age 72, left hemisphere 83.6
2693 Female, age 94, both hemispheres 83.4
2245 Female, age 91, both hemispheres 80.7
2250 Female, age 67, right hemisphere 80.1
2622 Female, age 67, right hemisphere 76.7
Perirhinal gyrus
nTPM: 88.2
1794 Male, age 80, right hemisphere 90.9
1847 Female, age 91, left hemisphere 90.0
1841 Female, age 85, right hemisphere 89.2
2848 Male, age 76, right hemisphere 86.8
2521 Female, age 94, right hemisphere 84.1
Subiculum
nTPM: 88.0
2438 Female, age 94, left hemisphere 93.7
1901 Male, age 80, both hemispheres 89.6
2042 Male, age 76, both hemispheres 89.2
2619 Male, age 74, both hemispheres 87.4
1977 Female, age 85, both hemispheres 85.7
2729 Female, age 91, right hemisphere 82.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.9
Samples: 197

Max nTPM: 165.2
Min nTPM: 37.4
Std nTPM: 17.9
Median nTPM: 92.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 148.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 139.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 137.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 133.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 133.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 132.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 131.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 131.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 131.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 130.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.3
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 27.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.6
Sample C Male 1.2
Sample D Male 1.9
Entorhinal cortex
nTPM: 1.8
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 1.4
Sample C Male 2.6
Sample D Male 1.7
Subiculum
nTPM: 2.0
Samples: 4

Max nTPM: 3.6
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 2.3
Sample C Male 3.6
Sample D Male 1.7
Ventral hippocampus
nTPM: 1.8
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.3
Sample A Female 1.7
Sample B Female 2.8
Sample C Male 1.3
Sample D Male 1.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 30.6
Min nTPM: 27.3
Sample A Male 27.3
Sample B Male 30.3
Sample C Female 30.4
Sample D Female 30.6
Hippocampal formation
nTPM: 32.3
Samples: 4

Max nTPM: 34.3
Min nTPM: 30.6
Sample A Male 32.5
Sample B Male 30.6
Sample C Female 34.3
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
70429130 Antisense, RP_050614_01_A10, Mouse strain C57BL/6J (56 days, male) 1.9

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