We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TMEM230
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • TMEM230
BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:107.4 nTPM
GTEx:107.4 nTPM
FANTOM5:44.8 Scaled Tags Per Million
Pig:2.6 nTPM
Mouse:109.2 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 107.4
GTEx sample id Sample description nTPM
Retina
Average nTPM: 107.4
Samples: 105

Max nTPM: 175.7
Min nTPM: 72.0
Std nTPM: 19.7
Median nTPM:
490_1 67 years, female 175.7
414_1 84 years, female 156.4
415_1 77 years, female 151.6
162_1 79 years, female 151.3
491_1 89 years, female 149.4
413_1 59 years, female 145.3
142_1 61 years, female 143.5
315_1 62 years, female 140.9
126_1 63 years, male 139.8
466_1 57 years, female 135.9
32_1 67 years, male 132.8
6_1 73 years, female 128.5
109_1 81 years, female 128.3
526_1 61 years, male 127.0
115_1 83 years, male 126.8
501_1 88 years, male 126.2
217_1 76 years, male 125.9
347_1 72 years, male 124.9
2_1 77 years, female 124.7
117_1 61 years, male 124.4
499_1 55 years, female 123.1
468_1 89 years, male 122.7
18_1 88 years, male 122.5
81_1 67 years, male 122.3
35_1 74 years, female 122.1
9_1 66 years, female 121.8
265_1 87 years, male 120.7
89_1 63 years, male 119.6
153_1 70 years, female 119.2
145_1 84 years, male 118.0
120_1 70 years, female 116.5
42_1 85 years, male 115.8
246_1 77 years, male 115.4
518_1 75 years, female 114.8
229_1 69 years, female 114.0
324_1 76 years, male 112.4
377_1 82 years, female 111.4
266_1 85 years, male 110.1
254_1 77 years, female 110.0
480_1 63 years, male 108.8
389_1 86 years, female 108.7
495_1 57 years, female 108.3
139_1 64 years, female 108.0
375_1 74 years, female 107.5
137_1 83 years, male 107.3
319_1 81 years, male 107.3
313_1 79 years, female 106.8
354_1 81 years, female 106.7
243_1 75 years, male 106.3
292_1 71 years, male 106.1
396_1 62 years, male 106.0
149_1 88 years, male 105.7
119_1 70 years, female 105.6
352_1 62 years, male 105.4
17_1 71 years, male 104.9
308_1 70 years, female 104.7
307_1 66 years, female 103.5
425_1 59 years, female 103.3
394_1 75 years, female 101.7
349_1 83 years, male 101.2
335_1 73 years, female 101.1
251_1 78 years, male 101.0
43_1 64 years, female 100.9
376_1 75 years, female 99.8
517_1 88 years, male 99.5
406_1 79 years, male 99.4
4_1 88 years, female 99.3
99_1 64 years, male 99.0
447_1 81 years, male 97.8
288_1 66 years, female 97.1
286_1 68 years, female 97.0
189_1 76 years, male 96.8
351_1 91 years, male 96.3
355_1 70 years, female 95.8
503_1 68 years, male 95.7
386_1 76 years, male 95.6
384_1 83 years, male 95.4
177_1 74 years, male 94.2
405_1 91 years, male 93.9
293_1 68 years, female 93.8
320_1 89 years, female 92.5
322_1 76 years, male 92.2
404_1 82 years, female 92.1
379_1 60 years, male 92.0
237_1 82 years, male 91.7
318_1 68 years, male 90.4
356_1 87 years, female 89.2
311_1 78 years, male 87.7
506_1 65 years, male 87.5
321_1 62 years, female 87.2
172_1 72 years, female 86.4
41_1 94 years, female 85.6
350_1 84 years, female 85.4
291_1 76 years, male 84.0
314_1 67 years, male 83.7
173_1 67 years, male 83.3
316_1 62 years, male 82.7
317_1 60 years, male 82.2
218_1 71 years, female 80.3
452_1 88 years, female 80.3
264_1 73 years, female 79.8
295_1 61 years, female 75.6
348_1 84 years, male 73.8
163_1 78 years, male 73.7
353_1 82 years, female 72.0
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 44.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 44.8
FF:10030-101E3 24-65 years, mixed 44.8

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 2.6
Pig sample Sample description nTPM
Retina
nTPM: 2.6
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.4
Sample A Female 2.8
Sample B Female 3.7
Sample C Male 2.6
Sample D Male 1.4

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 109.2
Mouse sample Sample description nTPM
Retina
nTPM: 109.2
Samples: 4

Max nTPM: 115.2
Min nTPM: 102.7
Sample A Male 111.0
Sample B Male 107.7
Sample C Female 115.2
Sample D Female 102.7

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.