HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:552.7 nTPM
HPA:552.7 nTPM
GTEx:396.0 nTPM
FANTOM5:45.4 Scaled Tags Per Million
Pig:302.0 nTPM
Mouse:374.6 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003512Antibody HPA073501
Glial cells Not detectedMedium
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 552.7
Sample id Sample description nTPM
Hippocampus
nTPM: 552.7
1898 Male, age 80, left hemisphere 565.1
2621 Female, age 67, right hemisphere 554.9
2529 Female, age 94, left hemisphere 550.9
1855 Male, age 76, left hemisphere 550.8
2148 Female, age 91, left hemisphere 547.8
1911 Female, age 85, right hemisphere 546.6
Dentate gyrus
nTPM: 548.1
2531 Female, age 67, both hemispheres 567.2
2530 Female, age 94, left hemisphere 557.5
2010 Male, age 76, both hemispheres 552.5
2528 Male, age 74, both hemispheres 544.3
1927 Female, age 91, both hemispheres 537.3
2246 Female, age 85, both hemispheres 529.6
Entorhinal gyrus
nTPM: 538.7
2686 Male, age 75, right hemisphere 559.2
2117 Female, age 91, right hemisphere 546.6
1787 Male, age 76, left hemisphere 537.4
1938 Female, age 85, left hemisphere 532.6
2613 Female, age 94, left hemisphere 532.1
2764 Male, age 80, right hemisphere 524.4
Hippocampus, CA1
nTPM: 539.2
2045 Male, age 76, both hemispheres 557.6
1873 Female, age 85, both hemispheres 540.9
2082 Female, age 91, right hemisphere 540.3
2527 Male, age 74, both hemispheres 537.2
2749 Male, age 80, left hemisphere 520.1
Hippocampus, CA2
nTPM: 538.5
1963 Male, age 80, left hemisphere 553.5
2437 Female, age 94, left hemisphere 545.0
2113 Female, age 91, right hemisphere 540.1
1892 Male, age 76, both hemispheres 537.4
1940 Female, age 85, left hemisphere 530.5
2249 Male, age 74, both hemispheres 524.8
Hippocampus, CA3
nTPM: 550.0
2861 Female, age 67, both hemispheres 577.3
1867 Male, age 76, both hemispheres 556.8
2436 Male, age 74, both hemispheres 549.2
1891 Female, age 85, both hemispheres 547.2
2620 Female, age 94, left hemisphere 535.8
2137 Male, age 80, left hemisphere 533.5
Parahippocampal cortex
nTPM: 525.2
2018 Male, age 76, both hemispheres 555.2
2250 Female, age 67, right hemisphere 532.1
2692 Male, age 74, both hemispheres 526.2
1850 Male, age 80, both hemispheres 523.2
2622 Female, age 67, right hemisphere 523.1
2245 Female, age 91, both hemispheres 522.8
1933 Female, age 85, both hemispheres 520.2
2532 Female, age 72, left hemisphere 519.6
1990 Female, age 91, right hemisphere 516.8
2693 Female, age 94, both hemispheres 512.8
Perirhinal gyrus
nTPM: 523.8
1847 Female, age 91, left hemisphere 531.2
1841 Female, age 85, right hemisphere 528.2
2521 Female, age 94, right hemisphere 527.0
1794 Male, age 80, right hemisphere 519.4
2848 Male, age 76, right hemisphere 513.4
Subiculum
nTPM: 537.6
2042 Male, age 76, both hemispheres 557.1
2729 Female, age 91, right hemisphere 549.7
2619 Male, age 74, both hemispheres 537.5
1977 Female, age 85, both hemispheres 533.3
1901 Male, age 80, both hemispheres 530.4
2438 Female, age 94, left hemisphere 517.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 396.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 396.0
Samples: 197

Max nTPM: 815.3
Min nTPM: 199.2
Std nTPM: 110.0
Median nTPM: 372.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 815.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 756.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 725.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 713.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 704.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 690.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 678.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 669.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 657.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 625.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 598.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.4
FF:10169-103B7 60 years, female 63.8
FF:10153-102I9 76 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 302.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 302.0
Samples: 4

Max nTPM: 396.3
Min nTPM: 222.4
Sample A Female 396.3
Sample B Female 278.6
Sample C Male 310.8
Sample D Male 222.4
Entorhinal cortex
nTPM: 250.7
Samples: 4

Max nTPM: 321.7
Min nTPM: 178.0
Sample A Female 212.7
Sample B Female 321.7
Sample C Male 290.5
Sample D Male 178.0
Subiculum
nTPM: 252.4
Samples: 4

Max nTPM: 351.8
Min nTPM: 198.8
Sample A Female 351.8
Sample B Female 254.6
Sample C Male 198.8
Sample D Male 204.4
Ventral hippocampus
nTPM: 248.8
Samples: 4

Max nTPM: 301.4
Min nTPM: 221.5
Sample A Female 233.4
Sample B Female 221.5
Sample C Male 301.4
Sample D Male 238.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 374.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 324.8
Samples: 4

Max nTPM: 364.5
Min nTPM: 300.4
Sample A Male 319.1
Sample B Male 300.4
Sample C Female 364.5
Sample D Female 315.1
Hippocampal formation
nTPM: 374.6
Samples: 4

Max nTPM: 402.4
Min nTPM: 324.2
Sample A Male 388.2
Sample B Male 324.2
Sample C Female 402.4
Sample D Female 383.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
68795446 Antisense, RP_041130_01_F11, Mouse strain C57BL/6J (56 days, male) 11.8
74047927 Antisense, RP_051214_02_D12, Mouse strain C57BL/6J (56 days, male) 9.6

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The Human Protein Atlas

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