We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPLP0
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • RPLP0
TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1260.0 nTPM
HPA:1260.0 nTPM
GTEx:1225.9 nTPM
FANTOM5:103.9 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003512Antibody HPA073501
Glandular cells MediumHigh



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 1260.0
overview
Male, age 65
Small intestine sample 232
nTPM: 1584.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1102.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1186.8
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1166

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1225.9
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1225.9
Samples: 187

Max nTPM: 2179.4
Min nTPM: 612.0
Std nTPM: 290.3
Median nTPM: 1193.5
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 2179.4
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1997.3
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 1972.4
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 1948.3
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 1888.9
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 1873.9
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1867.3
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 1860.9
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 1843.1
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 1837.8
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1834.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 1814.0
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 1811.8
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 1798.1
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 1783.3
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1750.6
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1668.7
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1668.2
GTEX-14PK6-1626-SM-6871I 70-79 years, female 1662.1
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1657.6
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 1620.0
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1604.3
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 1582.5
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1524.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1523.2
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 1517.7
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1497.9
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1488.2
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 1476.5
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 1463.9
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 1454.9
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1454.8
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 1448.3
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 1437.2
GTEX-183FY-1626-SM-793D8 20-29 years, male 1436.1
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 1435.9
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1435.6
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1422.1
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1421.2
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1421.1
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1410.9
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 1409.7
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1394.5
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 1387.9
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1368.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 1366.8
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1365.9
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1365.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1351.8
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1350.0
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1349.5
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 1349.1
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1333.3
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1327.0
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1323.4
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1317.9
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 1317.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1315.1
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 1314.1
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1312.5
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 1312.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 1296.7
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 1294.5
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1292.4
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1279.5
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1279.3
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1275.4
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 1271.3
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1261.0
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1256.4
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1255.1
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1252.8
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1249.8
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1249.1
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1248.2
GTEX-1192X-2526-SM-59868 50-59 years, male 1246.6
GTEX-1C475-1426-SM-793CH 40-49 years, female 1239.0
GTEX-13O61-1326-SM-5KM31 60-69 years, male 1238.7
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1237.5
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 1232.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1231.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1230.2
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1229.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1220.6
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1220.6
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 1220.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1213.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1203.1
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1199.9
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1198.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1197.7
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1196.5
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1195.7
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 1193.5
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1191.1
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1186.3
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1184.3
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1182.7
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1179.6
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1175.5
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 1175.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1172.8
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1167.0
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 1162.9
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1161.2
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1158.7
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 1156.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1154.8
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 1150.4
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1147.8
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1143.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1133.9
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 1132.3
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1131.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1131.6
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 1122.7
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 1121.9
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1120.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1117.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1116.6
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1108.6
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1108.4
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1105.7
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1104.4
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1094.2
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 1093.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1091.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1091.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1084.3
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1078.0
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1076.3
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 1072.0
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1065.6
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 1065.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1064.5
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1063.7
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1062.9
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1061.6
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1054.2
GTEX-14PN3-2026-SM-68729 60-69 years, female 1053.7
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1052.4
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1036.2
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1035.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1006.4
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1006.0
GTEX-13111-1426-SM-5DUW3 50-59 years, male 996.8
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 994.6
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 991.9
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 991.4
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 987.8
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 987.5
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 985.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 970.4
GTEX-1122O-1326-SM-5H11F 60-69 years, female 956.9
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 954.7
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 953.7
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 948.5
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 938.2
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 936.0
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 932.2
GTEX-YFCO-1326-SM-664NV 40-49 years, male 930.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 930.4
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 924.6
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 921.3
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 916.5
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 914.7
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 898.8
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 884.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 881.6
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 869.1
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 857.5
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 854.3
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 850.1
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 846.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 834.7
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 824.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 805.8
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 803.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 799.8
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 774.1
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 765.7
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 757.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 756.3
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 752.7
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 741.2
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 657.8
GTEX-ZTSS-0926-SM-59865 40-49 years, male 612.0
Show allShow less

SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 103.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 103.9
FF:10024-101D6 15,40,85 years, mixed 103.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.