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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1703.7 nTPM
GTEx:1703.7 nTPM
FANTOM5:216.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003512Antibody HPA073501
Squamous epithelial cells Not detectedLow



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1703.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 1703.7
Samples: 156

Max nTPM: 3420.8
Min nTPM: 601.7
Std nTPM: 580.0
Median nTPM: 1573.3
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3420.8
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 3194.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3078.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 3012.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2904.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2838.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2805.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2752.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2680.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 2635.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2633.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2569.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 2566.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2485.5
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2478.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2467.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2442.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2437.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2419.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 2415.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 2389.0
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2381.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2380.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2365.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 2356.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2342.7
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2323.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 2322.9
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2317.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 2261.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2244.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2233.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 2229.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2219.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2204.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2192.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2188.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2181.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 2135.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 2132.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2090.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 2076.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 2068.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2055.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2032.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2027.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 2022.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2022.2
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2010.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2009.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1992.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 1984.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 1982.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 1950.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 1920.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1911.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1909.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1868.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1845.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1830.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1817.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1813.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 1779.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1778.1
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 1749.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1749.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1747.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 1732.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1723.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1721.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1659.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1659.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 1643.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 1600.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 1584.1
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1578.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1577.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1576.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1570.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1563.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 1552.2
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1551.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1535.5
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1525.9
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 1515.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1511.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 1506.0
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1505.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1503.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 1502.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1492.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 1492.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1487.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 1486.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1481.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 1474.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 1470.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1459.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1456.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1453.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1445.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1436.4
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1435.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1429.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 1422.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1409.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1405.9
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1402.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1400.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 1392.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1387.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1375.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 1357.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 1333.6
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1291.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1266.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1259.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1222.9
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1190.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1184.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1179.9
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1171.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1167.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1157.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1157.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1150.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1147.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1141.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 1138.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1126.9
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1110.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1105.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1085.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1082.2
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 1062.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1050.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1049.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1043.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1028.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 1005.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1002.1
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 985.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 983.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 952.1
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 942.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 939.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 919.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 887.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 846.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 819.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 812.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 789.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 764.9
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 762.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 729.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 601.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 216.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 216.2
FF:10204-103F6 68 years, female 216.2

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