HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:87.7 nTPM
HPA:87.7 nTPM
GTEx:97.5 nTPM
FANTOM5:73.2 Scaled Tags Per Million
Pig:56.8 nTPM
Mouse:88.6 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.7
Sample id Sample description nTPM
Hippocampus
nTPM: 74.7
2529 Female, age 94, left hemisphere 84.1
1911 Female, age 85, right hemisphere 80.8
2621 Female, age 67, right hemisphere 74.5
1898 Male, age 80, left hemisphere 70.8
2148 Female, age 91, left hemisphere 70.2
1855 Male, age 76, left hemisphere 67.6
Dentate gyrus
nTPM: 71.8
2528 Male, age 74, both hemispheres 78.9
2530 Female, age 94, left hemisphere 75.4
2010 Male, age 76, both hemispheres 71.8
2246 Female, age 85, both hemispheres 71.8
2531 Female, age 67, both hemispheres 67.7
1927 Female, age 91, both hemispheres 65.1
Entorhinal gyrus
nTPM: 86.2
2117 Female, age 91, right hemisphere 99.1
2613 Female, age 94, left hemisphere 89.9
2764 Male, age 80, right hemisphere 89.8
2686 Male, age 75, right hemisphere 87.8
1787 Male, age 76, left hemisphere 75.8
1938 Female, age 85, left hemisphere 75.1
Hippocampus, CA1
nTPM: 69.5
2527 Male, age 74, both hemispheres 77.1
2082 Female, age 91, right hemisphere 76.0
1873 Female, age 85, both hemispheres 71.0
2749 Male, age 80, left hemisphere 64.4
2045 Male, age 76, both hemispheres 59.0
Hippocampus, CA2
nTPM: 75.3
2249 Male, age 74, both hemispheres 82.3
2437 Female, age 94, left hemisphere 78.9
1963 Male, age 80, left hemisphere 77.2
2113 Female, age 91, right hemisphere 76.6
1940 Female, age 85, left hemisphere 74.1
1892 Male, age 76, both hemispheres 62.9
Hippocampus, CA3
nTPM: 71.9
1891 Female, age 85, both hemispheres 84.8
2436 Male, age 74, both hemispheres 79.0
1867 Male, age 76, both hemispheres 72.9
2620 Female, age 94, left hemisphere 66.5
2861 Female, age 67, both hemispheres 65.0
2137 Male, age 80, left hemisphere 63.3
Parahippocampal cortex
nTPM: 79.8
2692 Male, age 74, both hemispheres 92.6
2622 Female, age 67, right hemisphere 85.0
2532 Female, age 72, left hemisphere 82.6
1990 Female, age 91, right hemisphere 82.0
2693 Female, age 94, both hemispheres 79.4
2018 Male, age 76, both hemispheres 78.2
1850 Male, age 80, both hemispheres 76.7
2245 Female, age 91, both hemispheres 75.6
1933 Female, age 85, both hemispheres 74.6
2250 Female, age 67, right hemisphere 70.8
Perirhinal gyrus
nTPM: 72.5
2848 Male, age 76, right hemisphere 76.7
1794 Male, age 80, right hemisphere 75.0
2521 Female, age 94, right hemisphere 71.2
1847 Female, age 91, left hemisphere 70.9
1841 Female, age 85, right hemisphere 68.5
Subiculum
nTPM: 87.7
2042 Male, age 76, both hemispheres 93.7
2619 Male, age 74, both hemispheres 91.1
2438 Female, age 94, left hemisphere 90.2
1901 Male, age 80, both hemispheres 90.0
1977 Female, age 85, both hemispheres 82.7
2729 Female, age 91, right hemisphere 78.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 97.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 97.5
Samples: 197

Max nTPM: 313.2
Min nTPM: 23.6
Std nTPM: 35.8
Median nTPM: 92.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 313.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 232.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 195.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 191.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 173.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 164.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 163.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 162.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 161.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 160.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 155.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.2
FF:10153-102I9 76 years, female 85.8
FF:10169-103B7 60 years, female 60.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.8
Samples: 4

Max nTPM: 80.6
Min nTPM: 30.0
Sample A Female 74.7
Sample B Female 42.0
Sample C Male 80.6
Sample D Male 30.0
Entorhinal cortex
nTPM: 37.9
Samples: 4

Max nTPM: 42.6
Min nTPM: 35.8
Sample A Female 35.8
Sample B Female 42.6
Sample C Male 36.6
Sample D Male 36.5
Subiculum
nTPM: 38.1
Samples: 4

Max nTPM: 44.5
Min nTPM: 34.6
Sample A Female 44.5
Sample B Female 37.7
Sample C Male 35.6
Sample D Male 34.6
Ventral hippocampus
nTPM: 44.2
Samples: 4

Max nTPM: 51.5
Min nTPM: 31.4
Sample A Female 44.8
Sample B Female 31.4
Sample C Male 48.9
Sample D Male 51.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 88.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.6
Samples: 4

Max nTPM: 99.2
Min nTPM: 74.4
Sample A Male 99.2
Sample B Male 94.6
Sample C Female 86.0
Sample D Female 74.4
Hippocampal formation
nTPM: 82.6
Samples: 4

Max nTPM: 89.5
Min nTPM: 76.7
Sample A Male 82.9
Sample B Male 81.4
Sample C Female 76.7
Sample D Female 89.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
67936208 Antisense, RP_040928_01_A08, Mouse strain C57BL/6J (56 days, male) 15.7
68196977 Antisense, RP_040928_01_A08, Mouse strain C57BL/6J (56 days, male) 6.1

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