HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:108.8 nTPM
HPA:108.8 nTPM
GTEx:107.6 nTPM
FANTOM5:104.0 Scaled Tags Per Million
Pig:59.9 nTPM
Mouse:107.8 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021241Antibody HPA024031Antibody CAB003681Antibody CAB068216
Glial cells HighHighHighHigh
Neuronal cells LowNot detectedNot detectedLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 108.8
Sample id Sample description nTPM
Hippocampus
nTPM: 108.8
1911 Female, age 85, right hemisphere 112.1
2529 Female, age 94, left hemisphere 111.1
2148 Female, age 91, left hemisphere 109.5
1855 Male, age 76, left hemisphere 108.8
1898 Male, age 80, left hemisphere 108.1
2621 Female, age 67, right hemisphere 103.3
Dentate gyrus
nTPM: 103.3
2528 Male, age 74, both hemispheres 116.2
2010 Male, age 76, both hemispheres 111.7
2530 Female, age 94, left hemisphere 102.2
2246 Female, age 85, both hemispheres 100.6
1927 Female, age 91, both hemispheres 95.3
2531 Female, age 67, both hemispheres 94.1
Entorhinal gyrus
nTPM: 102.4
2117 Female, age 91, right hemisphere 128.2
1787 Male, age 76, left hemisphere 104.0
1938 Female, age 85, left hemisphere 102.0
2764 Male, age 80, right hemisphere 99.6
2686 Male, age 75, right hemisphere 92.3
2613 Female, age 94, left hemisphere 88.3
Hippocampus, CA1
nTPM: 102.7
2527 Male, age 74, both hemispheres 112.9
1873 Female, age 85, both hemispheres 110.4
2082 Female, age 91, right hemisphere 102.5
2045 Male, age 76, both hemispheres 101.1
2749 Male, age 80, left hemisphere 86.8
Hippocampus, CA2
nTPM: 102.9
2249 Male, age 74, both hemispheres 119.2
1940 Female, age 85, left hemisphere 107.5
2113 Female, age 91, right hemisphere 104.5
1963 Male, age 80, left hemisphere 101.2
2437 Female, age 94, left hemisphere 93.4
1892 Male, age 76, both hemispheres 91.6
Hippocampus, CA3
nTPM: 98.1
1891 Female, age 85, both hemispheres 114.0
2436 Male, age 74, both hemispheres 101.7
2861 Female, age 67, both hemispheres 97.1
2620 Female, age 94, left hemisphere 96.3
1867 Male, age 76, both hemispheres 95.5
2137 Male, age 80, left hemisphere 84.3
Parahippocampal cortex
nTPM: 98.9
2018 Male, age 76, both hemispheres 109.0
2692 Male, age 74, both hemispheres 108.1
2250 Female, age 67, right hemisphere 104.4
1990 Female, age 91, right hemisphere 101.4
2622 Female, age 67, right hemisphere 100.3
2245 Female, age 91, both hemispheres 97.8
1933 Female, age 85, both hemispheres 95.1
1850 Male, age 80, both hemispheres 94.6
2532 Female, age 72, left hemisphere 91.5
2693 Female, age 94, both hemispheres 87.0
Perirhinal gyrus
nTPM: 92.8
2521 Female, age 94, right hemisphere 96.0
1847 Female, age 91, left hemisphere 95.2
2848 Male, age 76, right hemisphere 91.8
1794 Male, age 80, right hemisphere 91.7
1841 Female, age 85, right hemisphere 89.1
Subiculum
nTPM: 107.8
2619 Male, age 74, both hemispheres 115.3
2729 Female, age 91, right hemisphere 113.0
2042 Male, age 76, both hemispheres 112.8
1901 Male, age 80, both hemispheres 105.3
1977 Female, age 85, both hemispheres 103.2
2438 Female, age 94, left hemisphere 96.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.6
Samples: 197

Max nTPM: 238.2
Min nTPM: 24.4
Std nTPM: 35.3
Median nTPM: 104.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 238.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 194.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 192.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 190.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 189.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 186.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 179.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 175.9
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 175.6
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 173.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 170.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.0
FF:10153-102I9 76 years, female 129.6
FF:10169-103B7 60 years, female 78.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.9
Samples: 4

Max nTPM: 78.7
Min nTPM: 39.7
Sample A Female 78.7
Sample B Female 48.2
Sample C Male 72.9
Sample D Male 39.7
Entorhinal cortex
nTPM: 47.1
Samples: 4

Max nTPM: 56.5
Min nTPM: 34.6
Sample A Female 44.8
Sample B Female 56.5
Sample C Male 52.5
Sample D Male 34.6
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 60.7
Min nTPM: 39.2
Sample A Female 60.7
Sample B Female 45.6
Sample C Male 47.0
Sample D Male 39.2
Ventral hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 74.9
Min nTPM: 39.7
Sample A Female 55.4
Sample B Female 39.7
Sample C Male 74.9
Sample D Male 56.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.5
Samples: 4

Max nTPM: 118.2
Min nTPM: 95.9
Sample A Male 118.2
Sample B Male 95.9
Sample C Female 107.2
Sample D Female 96.8
Hippocampal formation
nTPM: 107.8
Samples: 4

Max nTPM: 113.5
Min nTPM: 95.1
Sample A Male 111.6
Sample B Male 95.1
Sample C Female 110.8
Sample D Female 113.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
100143511 Antisense, RP_110407_01_E08, Mouse strain C57BL/6J (56 days, male) 3.5

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