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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:108.1 nTPM
FANTOM5:106.1 Scaled Tags Per Million
Pig:24.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021616Antibody CAB004035Antibody CAB047324Antibody CAB075739
Glial cells HighMediumHighLow
Neuronal cells Not detectedNot detectedMediumNot detected









CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 108.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 108.1
Samples: 246

Max nTPM: 243.0
Min nTPM: 24.6
Std nTPM: 41.2
Median nTPM: 100.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 243.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 229.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 226.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 221.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 217.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 216.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 212.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 203.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 203.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 198.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 197.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 196.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 188.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 188.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 187.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 184.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 182.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 181.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 179.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 178.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 176.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 169.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 168.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 167.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 165.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 164.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 164.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 162.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 160.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 157.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 157.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 156.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 155.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 154.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 152.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 152.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 151.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 151.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 148.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 147.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 147.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 146.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 143.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 141.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 141.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 140.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 140.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 139.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 139.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 138.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 138.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 135.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 134.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 134.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 134.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 133.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 131.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 130.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 129.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 128.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 128.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 127.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 127.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 127.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 127.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 126.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 126.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 125.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 125.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 125.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 125.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 124.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 124.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 124.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 123.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 122.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 122.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 120.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 119.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 118.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 118.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 115.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 115.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 114.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 113.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 113.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 113.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 113.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 113.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 112.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 111.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 111.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 110.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 109.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 109.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 108.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 108.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 108.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 107.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 107.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 106.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 106.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 106.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 106.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 106.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 106.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 104.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 103.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 103.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 103.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 102.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 102.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 102.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 101.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 101.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 100.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 100.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 100.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 100.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 99.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 99.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 99.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 98.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 98.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 98.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 97.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 97.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 97.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 96.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 96.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 96.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 96.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 95.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 95.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 94.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 93.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 92.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 92.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 92.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 92.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 91.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 91.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 90.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 90.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 89.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 89.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 88.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 88.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 88.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 87.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 87.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 87.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 86.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 86.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 86.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 86.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 86.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 86.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 85.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 85.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 85.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 84.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 84.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 84.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 83.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 82.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 82.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 82.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 82.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 81.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 81.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 81.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 81.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 81.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 81.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 81.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 80.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 80.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 80.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 80.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 80.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 80.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 80.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 79.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 79.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 78.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 78.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 78.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 78.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 77.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 77.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 76.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 76.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 76.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 76.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 75.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 75.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 74.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 74.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 73.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 73.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 71.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 70.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 69.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 69.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 68.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 64.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 64.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 63.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 63.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 62.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 60.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 55.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 55.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 52.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 52.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 51.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 51.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 43.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 37.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 33.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 27.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 27.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 24.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 106.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 106.1
FF:10164-103B2 76 years, female 106.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 24.3
Pig sample Sample description nTPM
Caudate
nTPM: 24.3
Samples: 4

Max nTPM: 29.5
Min nTPM: 19.7
Sample A Female 23.3
Sample B Female 24.8
Sample C Male 29.5
Sample D Male 19.7

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