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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:900.5 nTPM
HPA:900.5 nTPM
FANTOM5:244.6 Scaled Tags Per Million
Pig:351.9 nTPM
Allen mouse:12.6 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 900.5
Sample id Sample description nTPM
Area postrema
nTPM: 851.2
2799 Male, age 61, both hemispheres 873.7
2306 Male, age 80, both hemispheres 856.0
2054 Male, age 76, both hemispheres 824.0
Cuneate nuclei
nTPM: 830.4
2381 Male, age 80, both hemispheres 846.5
2131 Male, age 76, both hemispheres 824.4
2376 Male, age 61, both hemispheres 820.4
Dorsal medullary reticular nucleus
nTPM: 833.2
2040 Female, age 85, both hemispheres 860.9
2373 Male, age 61, both hemispheres 830.4
2088 Male, age 76, both hemispheres 808.4
Dorsal motor vagal complex
nTPM: 834.8
2133 Female, age 91, both hemispheres 860.4
2643 Male, age 74, both hemispheres 851.7
2844 Male, age 55, unknown 841.1
2813 Female, age 72, unknown 835.0
2000 Male, age 74, unknown 832.7
2807 Female, age 85, both hemispheres 827.1
2797 Male, age 61, both hemispheres 816.4
2185 Male, age 76, both hemispheres 814.4
Gigantocellular reticular nuclei, medullary
nTPM: 831.3
2314 Male, age 61, both hemispheres 850.3
1876 Female, age 85, both hemispheres 839.9
2387 Female, age 91, both hemispheres 831.4
2310 Male, age 80, both hemispheres 831.3
2462 Male, age 74, both hemispheres 821.9
2022 Male, age 76, right hemisphere 813.2
Gigantocellular reticular nuclei, pars
nTPM: 844.6
2084 Female, age 85, both hemispheres 861.2
2706 Male, age 80, both hemispheres 853.7
2168 Male, age 76, both hemispheres 843.4
2330 Male, age 80, both hemispheres 841.3
2336 Male, age 61, both hemispheres 823.7
Inferior olive
nTPM: 856.9
2563 Male, age 74, both hemispheres 878.2
2628 Female, age 91, both hemispheres 862.8
2178 Male, age 61, both hemispheres 855.1
2085 Female, age 85, both hemispheres 844.4
2379 Male, age 80, both hemispheres 844.2
Lateral medullary reticular nucleus
nTPM: 853.8
2374 Male, age 61, both hemispheres 863.5
2804 Female, age 91, both hemispheres 862.6
2852 Male, age 80, both hemispheres 852.4
2305 Male, age 74, both hemispheres 849.0
2044 Male, age 76, both hemispheres 848.5
2190 Female, age 85, both hemispheres 846.6
Medial vestibular nucleus
nTPM: 861.3
2624 Male, age 61, both hemispheres 874.6
2801 Male, age 74, both hemispheres 870.8
2803 Female, age 91, both hemispheres 869.3
2134 Male, age 76, both hemispheres 855.6
2093 Male, age 80, both hemispheres 853.5
2743 Female, age 85, both hemispheres 844.3
Motor hypoglossal nucleus
nTPM: 834.2
2132 Female, age 85, both hemispheres 872.3
2125 Female, age 91, both hemispheres 845.6
2182 Male, age 80, both hemispheres 833.5
2461 Male, age 61, both hemispheres 818.8
2277 Male, age 76, both hemispheres 801.0
Nucleus ambiguus
nTPM: 844.0
2071 Male, age 76, both hemispheres 845.9
2096 Female, age 85, both hemispheres 842.0
Nucleus cuneatus
nTPM: 843.4
2808 Female, age 85, both hemispheres 875.5
2564 Male, age 74, both hemispheres 872.0
2380 Male, age 80, both hemispheres 843.0
2805 Female, age 91, both hemispheres 842.4
2100 Male, age 76, both hemispheres 820.2
2562 Male, age 61, both hemispheres 807.5
Nucleus gracilis
nTPM: 854.3
2627 Male, age 74, both hemispheres 874.1
2382 Male, age 80, both hemispheres 858.9
2299 Female, age 85, both hemispheres 830.0
Nucleus raphe magnus
nTPM: 843.6
2172 Female, age 85, both hemispheres 879.7
2160 Male, age 61, both hemispheres 848.7
2051 Male, age 76, both hemispheres 848.5
2455 Male, age 74, both hemispheres 846.1
2328 Male, age 80, both hemispheres 829.5
2459 Female, age 91, both hemispheres 808.9
Nucleus raphe obscurus
nTPM: 860.5
2845 Female, age 85, midline 878.0
2800 Male, age 61, midline 872.2
2142 Male, age 76, midline 831.5
Nucleus raphe pallidus
nTPM: 900.5
1924 Male, age 61, midline 986.0
2183 Male, age 80, midline 873.6
2145 Male, age 76, midline 841.7
Nucleus tractus solitarii
nTPM: 819.2
2191 Female, age 85, both hemispheres 836.1
2144 Female, age 91, right hemisphere 828.0
2656 Male, age 76, both hemispheres 808.0
2307 Male, age 80, both hemispheres 804.7
Parvicellular reticular nuclei
nTPM: 840.1
2119 Male, age 80, both hemispheres 853.0
2095 Male, age 76, both hemispheres 852.7
2558 Male, age 74, both hemispheres 814.6
Parvicellular reticular nuclei, medullary
nTPM: 849.8
2091 Female, age 85, both hemispheres 856.0
2189 Female, age 91, both hemispheres 854.0
2181 Male, age 80, left hemisphere 839.4
Peritrigeminal nucleus
nTPM: 869.3
2067 Female, age 85, both hemispheres 895.2
2136 Male, age 76, both hemispheres 863.5
2179 Male, age 61, both hemispheres 849.3
Prepositus hypoglossal nucleus
nTPM: 858.1
2855 Female, age 85, right hemisphere 879.3
2086 Male, age 80, both hemispheres 836.9
Spinal trigeminal nucleus, caudal
nTPM: 839.2
2390 Female, age 91, both hemispheres 874.4
2642 Male, age 74, both hemispheres 843.6
2308 Male, age 80, both hemispheres 832.9
2447 Male, age 76, both hemispheres 824.7
2312 Male, age 61, both hemispheres 820.3
Spinal trigeminal nucleus, interpolar
nTPM: 860.3
2625 Male, age 61, both hemispheres 897.5
2066 Male, age 76, right hemisphere 877.0
2033 Male, age 80, both hemispheres 846.0
2389 Female, age 91, both hemispheres 845.9
2386 Female, age 85, both hemispheres 834.9
Spinal vestibular nucleus
nTPM: 847.4
2806 Female, age 85, both hemispheres 861.2
2796 Male, age 61, both hemispheres 854.0
2780 Male, age 80, both hemispheres 850.3
2186 Female, age 91, both hemispheres 843.2
2384 Male, age 74, both hemispheres 842.5
2748 Male, age 76, both hemispheres 833.3
Ventral medullary reticular nucleus
nTPM: 827.3
2060 Male, age 76, both hemispheres 828.7
2372 Male, age 61, both hemispheres 825.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 853.7
2741 Female, age 85, both hemispheres 866.9
2180 Male, age 61, both hemispheres 857.3
1986 Male, age 76, both hemispheres 852.8
2118 Male, age 80, both hemispheres 850.2
2302 Female, age 91, both hemispheres 841.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 244.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 244.6
FF:10174-103C3 60 years, female 311.0
FF:10155-103A2 76 years, female 255.7
FF:10038-101F2 18-64 years, mixed 167.1

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 351.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 351.9
Samples: 4

Max nTPM: 409.9
Min nTPM: 289.2
Sample A Female 311.2
Sample B Female 289.2
Sample C Male 397.4
Sample D Male 409.9

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.6
68633312 Antisense, RP_050125_02_F08, Mouse strain C57BL/6J (56 days, male) 12.6

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by the Knut & Alice Wallenberg Foundation.