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MYL6
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BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:927.1 nTPM
GTEx:927.1 nTPM
FANTOM5:261.0 Scaled Tags Per Million
Pig:128.6 nTPM
Mouse:925.6 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 927.1
GTEx sample id Sample description nTPM
Retina
Average nTPM: 927.1
Samples: 105

Max nTPM: 1473.3
Min nTPM: 376.3
Std nTPM: 233.4
Median nTPM:
375_1 74 years, female 1473.3
386_1 76 years, male 1471.1
237_1 82 years, male 1419.8
319_1 81 years, male 1369.6
35_1 74 years, female 1318.3
218_1 71 years, female 1312.3
447_1 81 years, male 1294.3
379_1 60 years, male 1266.4
6_1 73 years, female 1253.2
99_1 64 years, male 1245.7
377_1 82 years, female 1230.7
355_1 70 years, female 1228.8
352_1 62 years, male 1177.2
384_1 83 years, male 1174.6
354_1 81 years, female 1170.3
356_1 87 years, female 1164.0
394_1 75 years, female 1163.7
243_1 75 years, male 1140.8
350_1 84 years, female 1133.5
177_1 74 years, male 1128.9
163_1 78 years, male 1125.3
172_1 72 years, female 1121.5
286_1 68 years, female 1113.2
115_1 83 years, male 1097.5
321_1 62 years, female 1094.9
353_1 82 years, female 1091.3
229_1 69 years, female 1075.5
189_1 76 years, male 1074.0
153_1 70 years, female 1065.4
335_1 73 years, female 1057.0
322_1 76 years, male 1047.3
404_1 82 years, female 1043.6
376_1 75 years, female 1043.3
246_1 77 years, male 1039.1
317_1 60 years, male 1035.7
389_1 86 years, female 1030.1
316_1 62 years, male 1028.9
17_1 71 years, male 1015.8
406_1 79 years, male 1013.7
351_1 91 years, male 1011.5
349_1 83 years, male 1005.3
503_1 68 years, male 1005.3
266_1 85 years, male 981.3
173_1 67 years, male 977.8
396_1 62 years, male 971.3
126_1 63 years, male 967.7
292_1 71 years, male 967.7
318_1 68 years, male 959.8
264_1 73 years, female 957.7
347_1 72 years, male 953.4
320_1 89 years, female 942.4
137_1 83 years, male 941.5
452_1 88 years, female 932.8
526_1 61 years, male 926.7
251_1 78 years, male 923.4
425_1 59 years, female 914.0
480_1 63 years, male 913.9
405_1 91 years, male 905.7
120_1 70 years, female 905.5
2_1 77 years, female 901.8
9_1 66 years, female 890.7
295_1 61 years, female 877.2
145_1 84 years, male 868.6
162_1 79 years, female 858.3
506_1 65 years, male 856.5
315_1 62 years, female 848.9
4_1 88 years, female 844.7
324_1 76 years, male 841.5
293_1 68 years, female 825.1
142_1 61 years, female 815.1
109_1 81 years, female 811.7
254_1 77 years, female 810.5
468_1 89 years, male 809.9
291_1 76 years, male 807.4
265_1 87 years, male 807.3
348_1 84 years, male 805.7
517_1 88 years, male 802.6
518_1 75 years, female 791.7
18_1 88 years, male 782.8
42_1 85 years, male 779.3
313_1 79 years, female 776.6
41_1 94 years, female 773.5
307_1 66 years, female 748.9
217_1 76 years, male 744.0
117_1 61 years, male 743.9
81_1 67 years, male 718.9
308_1 70 years, female 695.3
311_1 78 years, male 692.9
139_1 64 years, female 691.1
119_1 70 years, female 680.3
414_1 84 years, female 677.1
415_1 77 years, female 673.8
288_1 66 years, female 645.9
43_1 64 years, female 631.2
499_1 55 years, female 602.2
314_1 67 years, male 589.4
466_1 57 years, female 571.3
495_1 57 years, female 565.1
32_1 67 years, male 564.0
89_1 63 years, male 521.8
413_1 59 years, female 509.0
501_1 88 years, male 466.6
149_1 88 years, male 432.5
490_1 67 years, female 403.1
491_1 89 years, female 376.3
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 261.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 261.0
FF:10030-101E3 24-65 years, mixed 261.0

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 128.6
Pig sample Sample description nTPM
Retina
nTPM: 128.6
Samples: 4

Max nTPM: 137.8
Min nTPM: 115.8
Sample A Female 123.1
Sample B Female 137.7
Sample C Male 137.8
Sample D Male 115.8

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 925.6
Mouse sample Sample description nTPM
Retina
nTPM: 925.7
Samples: 4

Max nTPM: 1104.8
Min nTPM: 816.4
Sample A Male 931.6
Sample B Male 816.4
Sample C Female 1104.8
Sample D Female 849.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.