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DPYSL2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:145.8 nTPM
FANTOM5:671.9 Scaled Tags Per Million
Pig:296.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA002381Antibody CAB018719
Glial cells MediumHigh
Neuronal cells LowLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 145.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 145.8
Samples: 246

Max nTPM: 376.5
Min nTPM: 86.5
Std nTPM: 37.7
Median nTPM: 137.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 376.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 276.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 269.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 255.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 247.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 243.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 241.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 237.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 231.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 229.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 228.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 227.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 222.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 214.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 213.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 205.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 204.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 201.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 200.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 198.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 198.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 197.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 197.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 195.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 194.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 193.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 189.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 189.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 188.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 187.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 186.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 183.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 182.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 181.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 180.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 180.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 179.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 178.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 177.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 176.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 175.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 174.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 173.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 173.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 172.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 171.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 168.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 168.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 168.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 166.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 165.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 165.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 165.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 164.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 163.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 163.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 163.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 163.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 163.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 162.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 161.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 161.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 161.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 159.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 159.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 159.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 159.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 159.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 159.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 158.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 158.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 158.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 158.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 158.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 158.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 157.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 157.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 157.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 157.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 157.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 156.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 155.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 154.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 153.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 153.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 153.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 153.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 152.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 152.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 151.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 151.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 151.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 150.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 150.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 149.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 149.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 149.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 149.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 148.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 148.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 145.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 145.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 145.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 145.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 144.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 144.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 144.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 144.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 144.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 143.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 142.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 142.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 142.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 141.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 141.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 141.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 139.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 138.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 138.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 137.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 137.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 137.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 136.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 136.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 135.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 134.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 134.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 134.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 134.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 133.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 133.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 133.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 132.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 132.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 131.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 131.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 131.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 131.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 129.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 129.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 129.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 129.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 128.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 128.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 128.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 128.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 127.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 127.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 126.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 126.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 126.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 126.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 126.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 126.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 125.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 125.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 125.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 125.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 125.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 125.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 124.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 124.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 124.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 124.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 124.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 124.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 124.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 123.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 123.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 123.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 123.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 123.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 123.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 123.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 123.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 122.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 122.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 122.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 122.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 121.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 121.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 121.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 121.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 120.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 120.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 120.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 120.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 119.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 119.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 118.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 118.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 118.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 117.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 116.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 116.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 115.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 113.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 113.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 113.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 113.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 112.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 112.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 112.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 110.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 110.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 110.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 110.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 110.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 110.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 109.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 108.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 108.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 106.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 105.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 105.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 105.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 105.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 105.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 104.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 103.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 103.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 103.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 103.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 103.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 102.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 102.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 102.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 100.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 100.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 99.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 97.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 96.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 96.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 93.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 89.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 86.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 671.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 671.9
FF:10164-103B2 76 years, female 671.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 296.1
Pig sample Sample description nTPM
Caudate
nTPM: 296.1
Samples: 4

Max nTPM: 337.7
Min nTPM: 263.4
Sample A Female 263.4
Sample B Female 294.0
Sample C Male 337.7
Sample D Male 289.3

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