HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:699.9 nTPM
HPA:699.9 nTPM
GTEx:520.4 nTPM
FANTOM5:1811.6 Scaled Tags Per Million
Pig:499.1 nTPM
Mouse:1524.7 nTPM
Allen mouse:27.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072606Antibody HPA074351Antibody CAB005230
Glial cells Not detectedNot detectedMedium
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 699.9
Sample id Sample description nTPM
Hippocampus
nTPM: 622.3
1898 Male, age 80, left hemisphere 696.7
2529 Female, age 94, left hemisphere 633.5
2621 Female, age 67, right hemisphere 629.8
1855 Male, age 76, left hemisphere 628.8
1911 Female, age 85, right hemisphere 579.8
2148 Female, age 91, left hemisphere 565.4
Dentate gyrus
nTPM: 626.8
2010 Male, age 76, both hemispheres 697.0
1927 Female, age 91, both hemispheres 669.6
2530 Female, age 94, left hemisphere 641.6
2246 Female, age 85, both hemispheres 606.9
2528 Male, age 74, both hemispheres 582.8
2531 Female, age 67, both hemispheres 562.7
Entorhinal gyrus
nTPM: 621.6
1938 Female, age 85, left hemisphere 706.7
2764 Male, age 80, right hemisphere 682.7
1787 Male, age 76, left hemisphere 648.9
2686 Male, age 75, right hemisphere 576.9
2117 Female, age 91, right hemisphere 568.4
2613 Female, age 94, left hemisphere 546.2
Hippocampus, CA1
nTPM: 661.3
2749 Male, age 80, left hemisphere 812.0
1873 Female, age 85, both hemispheres 656.2
2045 Male, age 76, both hemispheres 643.5
2527 Male, age 74, both hemispheres 604.4
2082 Female, age 91, right hemisphere 590.4
Hippocampus, CA2
nTPM: 647.0
1892 Male, age 76, both hemispheres 784.9
1963 Male, age 80, left hemisphere 685.0
2249 Male, age 74, both hemispheres 630.4
1940 Female, age 85, left hemisphere 603.7
2437 Female, age 94, left hemisphere 595.5
2113 Female, age 91, right hemisphere 582.2
Hippocampus, CA3
nTPM: 625.7
2137 Male, age 80, left hemisphere 733.1
1867 Male, age 76, both hemispheres 699.1
2436 Male, age 74, both hemispheres 631.9
1891 Female, age 85, both hemispheres 590.4
2861 Female, age 67, both hemispheres 559.9
2620 Female, age 94, left hemisphere 539.8
Parahippocampal cortex
nTPM: 635.8
1850 Male, age 80, both hemispheres 730.6
1933 Female, age 85, both hemispheres 678.6
2250 Female, age 67, right hemisphere 660.8
1990 Female, age 91, right hemisphere 660.3
2532 Female, age 72, left hemisphere 652.1
2245 Female, age 91, both hemispheres 641.9
2018 Male, age 76, both hemispheres 641.6
2622 Female, age 67, right hemisphere 572.2
2692 Male, age 74, both hemispheres 569.8
2693 Female, age 94, both hemispheres 549.7
Perirhinal gyrus
nTPM: 699.9
1847 Female, age 91, left hemisphere 789.9
1841 Female, age 85, right hemisphere 738.5
1794 Male, age 80, right hemisphere 712.4
2848 Male, age 76, right hemisphere 669.8
2521 Female, age 94, right hemisphere 588.8
Subiculum
nTPM: 615.1
1977 Female, age 85, both hemispheres 669.9
1901 Male, age 80, both hemispheres 662.3
2042 Male, age 76, both hemispheres 627.8
2438 Female, age 94, left hemisphere 614.2
2619 Male, age 74, both hemispheres 571.3
2729 Female, age 91, right hemisphere 545.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 520.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 520.4
Samples: 197

Max nTPM: 2654.8
Min nTPM: 217.4
Std nTPM: 243.2
Median nTPM: 471.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 2654.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1530.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1189.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 1165.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 1068.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 992.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 960.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 891.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 886.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 879.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 842.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1811.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1811.6
FF:10169-103B7 60 years, female 2258.0
FF:10153-102I9 76 years, female 1365.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 499.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 499.2
Samples: 4

Max nTPM: 629.9
Min nTPM: 363.4
Sample A Female 629.9
Sample B Female 531.0
Sample C Male 472.3
Sample D Male 363.4
Entorhinal cortex
nTPM: 457.8
Samples: 4

Max nTPM: 485.8
Min nTPM: 401.9
Sample A Female 485.8
Sample B Female 462.6
Sample C Male 481.0
Sample D Male 401.9
Subiculum
nTPM: 477.6
Samples: 4

Max nTPM: 579.3
Min nTPM: 433.1
Sample A Female 579.3
Sample B Female 448.4
Sample C Male 449.5
Sample D Male 433.1
Ventral hippocampus
nTPM: 476.9
Samples: 4

Max nTPM: 563.6
Min nTPM: 359.7
Sample A Female 520.8
Sample B Female 359.7
Sample C Male 563.6
Sample D Male 463.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1524.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1317.7
Samples: 4

Max nTPM: 1480.5
Min nTPM: 1205.5
Sample A Male 1205.5
Sample B Male 1240.0
Sample C Female 1344.9
Sample D Female 1480.5
Hippocampal formation
nTPM: 1524.7
Samples: 4

Max nTPM: 1648.0
Min nTPM: 1449.4
Sample A Male 1485.2
Sample B Male 1516.1
Sample C Female 1648.0
Sample D Female 1449.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.2
69735168 Antisense, RP_050503_02_C01, Mouse strain C57BL/6J (56 days, male) 27.2

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