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HSP90AB1
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  • HSP90AB1
BRAIN RETINA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:339.5 nTPM
GTEx:339.5 nTPM
FANTOM5:928.1 Scaled Tags Per Million
Pig:146.5 nTPM
Mouse:709.5 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 339.5
GTEx sample id Sample description nTPM
Retina
Average nTPM: 339.5
Samples: 105

Max nTPM: 812.5
Min nTPM: 236.4
Std nTPM: 86.9
Median nTPM:
99_1 64 years, male 812.5
317_1 60 years, male 612.5
379_1 60 years, male 591.6
491_1 89 years, female 542.8
120_1 70 years, female 514.2
109_1 81 years, female 501.4
173_1 67 years, male 493.4
347_1 72 years, male 492.7
41_1 94 years, female 481.8
452_1 88 years, female 473.2
42_1 85 years, male 461.3
119_1 70 years, female 457.1
447_1 81 years, male 453.1
386_1 76 years, male 394.4
315_1 62 years, female 394.3
355_1 70 years, female 390.7
266_1 85 years, male 382.4
349_1 83 years, male 382.3
117_1 61 years, male 381.5
177_1 74 years, male 379.0
115_1 83 years, male 378.2
307_1 66 years, female 377.6
43_1 64 years, female 368.7
413_1 59 years, female 365.5
229_1 69 years, female 361.9
404_1 82 years, female 358.5
384_1 83 years, male 357.1
243_1 75 years, male 356.4
506_1 65 years, male 356.3
265_1 87 years, male 354.7
324_1 76 years, male 353.2
490_1 67 years, female 345.7
375_1 74 years, female 344.2
308_1 70 years, female 344.1
351_1 91 years, male 343.0
396_1 62 years, male 341.5
172_1 72 years, female 339.8
145_1 84 years, male 338.6
139_1 64 years, female 336.3
218_1 71 years, female 336.2
311_1 78 years, male 333.6
348_1 84 years, male 332.1
142_1 61 years, female 331.5
501_1 88 years, male 330.7
6_1 73 years, female 328.3
17_1 71 years, male 327.2
376_1 75 years, female 327.0
246_1 77 years, male 325.8
162_1 79 years, female 323.9
314_1 67 years, male 321.9
377_1 82 years, female 321.0
89_1 63 years, male 318.6
2_1 77 years, female 315.9
495_1 57 years, female 315.3
352_1 62 years, male 315.2
313_1 79 years, female 312.1
353_1 82 years, female 310.8
350_1 84 years, female 310.4
189_1 76 years, male 310.2
316_1 62 years, male 309.8
321_1 62 years, female 305.7
414_1 84 years, female 305.7
32_1 67 years, male 303.5
254_1 77 years, female 302.8
322_1 76 years, male 302.3
18_1 88 years, male 302.2
356_1 87 years, female 298.6
126_1 63 years, male 298.4
526_1 61 years, male 298.3
35_1 74 years, female 296.4
153_1 70 years, female 296.1
137_1 83 years, male 294.6
288_1 66 years, female 294.5
291_1 76 years, male 294.0
237_1 82 years, male 292.8
295_1 61 years, female 289.6
518_1 75 years, female 288.2
4_1 88 years, female 285.5
335_1 73 years, female 284.8
318_1 68 years, male 283.0
9_1 66 years, female 281.7
81_1 67 years, male 279.2
319_1 81 years, male 278.7
286_1 68 years, female 277.3
292_1 71 years, male 277.2
468_1 89 years, male 277.0
149_1 88 years, male 276.8
425_1 59 years, female 275.6
354_1 81 years, female 273.1
480_1 63 years, male 271.6
499_1 55 years, female 270.2
264_1 73 years, female 269.7
394_1 75 years, female 269.1
415_1 77 years, female 269.1
163_1 78 years, male 263.3
466_1 57 years, female 261.2
405_1 91 years, male 261.1
293_1 68 years, female 259.1
503_1 68 years, male 259.1
406_1 79 years, male 256.8
517_1 88 years, male 254.4
217_1 76 years, male 253.4
251_1 78 years, male 252.4
320_1 89 years, female 251.4
389_1 86 years, female 236.4
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 928.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 928.1
FF:10030-101E3 24-65 years, mixed 928.1

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 146.5
Pig sample Sample description nTPM
Retina
nTPM: 146.5
Samples: 4

Max nTPM: 176.6
Min nTPM: 130.4
Sample A Female 130.4
Sample B Female 176.6
Sample C Male 147.5
Sample D Male 131.3

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 709.5
Mouse sample Sample description nTPM
Retina
nTPM: 709.5
Samples: 4

Max nTPM: 887.0
Min nTPM: 610.2
Sample A Male 685.8
Sample B Male 655.1
Sample C Female 610.2
Sample D Female 887.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.