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HSP90AB1
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  • HSP90AB1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:454.2 nTPM
FANTOM5:1488.5 Scaled Tags Per Million
Pig:330.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA072606Antibody HPA074351Antibody CAB005230
Glial cells Not detectedNot detectedMedium
Neuronal cells Not detectedLowMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 454.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 454.2
Samples: 246

Max nTPM: 1519.7
Min nTPM: 236.9
Std nTPM: 180.8
Median nTPM: 418.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1519.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1415.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1362.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1245.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1034.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 991.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 991.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 920.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 893.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 889.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 855.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 791.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 730.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 688.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 682.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 680.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 672.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 670.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 658.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 657.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 651.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 645.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 637.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 618.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 606.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 606.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 605.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 600.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 597.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 597.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 592.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 591.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 576.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 572.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 568.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 568.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 563.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 558.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 554.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 551.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 547.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 543.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 538.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 537.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 536.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 532.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 525.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 519.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 518.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 517.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 514.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 514.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 513.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 513.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 513.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 510.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 508.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 507.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 507.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 507.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 506.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 503.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 502.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 499.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 496.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 494.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 492.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 491.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 490.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 488.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 487.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 486.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 485.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 484.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 483.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 483.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 483.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 479.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 477.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 473.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 473.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 473.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 471.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 470.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 470.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 467.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 462.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 461.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 459.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 459.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 458.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 458.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 453.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 452.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 448.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 448.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 448.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 447.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 442.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 441.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 441.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 440.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 438.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 437.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 434.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 433.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 433.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 431.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 431.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 431.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 431.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 430.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 428.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 427.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 425.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 425.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 424.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 424.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 422.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 422.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 422.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 419.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 418.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 418.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 417.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 415.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 415.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 414.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 414.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 413.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 411.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 409.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 407.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 407.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 406.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 406.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 405.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 404.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 401.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 400.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 396.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 395.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 394.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 392.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 392.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 391.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 389.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 388.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 388.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 388.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 388.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 387.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 387.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 386.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 385.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 383.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 382.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 382.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 380.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 379.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 378.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 378.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 378.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 377.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 377.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 375.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 373.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 372.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 369.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 367.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 367.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 365.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 364.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 364.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 358.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 358.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 358.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 356.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 355.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 355.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 354.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 354.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 352.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 347.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 346.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 346.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 345.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 344.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 342.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 338.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 337.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 336.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 333.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 333.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 333.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 331.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 331.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 331.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 329.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 328.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 328.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 328.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 327.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 323.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 323.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 323.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 323.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 321.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 319.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 319.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 318.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 315.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 314.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 312.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 310.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 309.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 309.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 307.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 306.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 305.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 305.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 305.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 299.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 297.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 291.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 286.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 277.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 274.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 274.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 271.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 269.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 269.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 267.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 267.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 266.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 262.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 262.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 259.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 258.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 258.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 258.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 256.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 255.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 248.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 248.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 236.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1488.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1488.5
FF:10164-103B2 76 years, female 1488.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 330.0
Pig sample Sample description nTPM
Caudate
nTPM: 330.0
Samples: 4

Max nTPM: 378.8
Min nTPM: 295.4
Sample A Female 312.7
Sample B Female 333.2
Sample C Male 378.8
Sample D Male 295.4

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