HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:26.6 nTPM
HPA:26.6 nTPM
GTEx:24.6 nTPM
FANTOM5:29.1 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:15.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027251Antibody HPA027280Antibody HPA028409Antibody CAB002686
Glial cells Not detectedLowNot detectedNot detected
Neuronal cells Not detectedNot detectedLowNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
2529 Female, age 94, left hemisphere 27.4
1855 Male, age 76, left hemisphere 26.3
1911 Female, age 85, right hemisphere 26.0
2148 Female, age 91, left hemisphere 25.6
2621 Female, age 67, right hemisphere 24.9
1898 Male, age 80, left hemisphere 22.0
Dentate gyrus
nTPM: 25.2
2010 Male, age 76, both hemispheres 27.3
2530 Female, age 94, left hemisphere 27.0
2531 Female, age 67, both hemispheres 26.1
2528 Male, age 74, both hemispheres 25.1
2246 Female, age 85, both hemispheres 23.7
1927 Female, age 91, both hemispheres 22.2
Entorhinal gyrus
nTPM: 24.9
2117 Female, age 91, right hemisphere 28.4
2764 Male, age 80, right hemisphere 26.5
2613 Female, age 94, left hemisphere 25.0
2686 Male, age 75, right hemisphere 25.0
1787 Male, age 76, left hemisphere 22.8
1938 Female, age 85, left hemisphere 21.7
Hippocampus, CA1
nTPM: 23.9
2082 Female, age 91, right hemisphere 25.4
2527 Male, age 74, both hemispheres 24.8
2045 Male, age 76, both hemispheres 23.9
1873 Female, age 85, both hemispheres 23.5
2749 Male, age 80, left hemisphere 21.6
Hippocampus, CA2
nTPM: 23.7
1963 Male, age 80, left hemisphere 25.1
2249 Male, age 74, both hemispheres 24.7
2113 Female, age 91, right hemisphere 24.6
2437 Female, age 94, left hemisphere 24.6
1940 Female, age 85, left hemisphere 22.6
1892 Male, age 76, both hemispheres 20.3
Hippocampus, CA3
nTPM: 25.1
2620 Female, age 94, left hemisphere 28.9
2861 Female, age 67, both hemispheres 26.7
1891 Female, age 85, both hemispheres 26.2
2436 Male, age 74, both hemispheres 23.7
1867 Male, age 76, both hemispheres 22.6
2137 Male, age 80, left hemisphere 22.6
Parahippocampal cortex
nTPM: 23.1
2692 Male, age 74, both hemispheres 26.7
2532 Female, age 72, left hemisphere 24.4
2018 Male, age 76, both hemispheres 24.2
2245 Female, age 91, both hemispheres 23.8
1990 Female, age 91, right hemisphere 23.5
2622 Female, age 67, right hemisphere 22.5
2693 Female, age 94, both hemispheres 22.4
1850 Male, age 80, both hemispheres 21.6
1933 Female, age 85, both hemispheres 21.3
2250 Female, age 67, right hemisphere 20.2
Perirhinal gyrus
nTPM: 20.5
2521 Female, age 94, right hemisphere 22.2
2848 Male, age 76, right hemisphere 21.1
1847 Female, age 91, left hemisphere 20.6
1794 Male, age 80, right hemisphere 20.0
1841 Female, age 85, right hemisphere 18.6
Subiculum
nTPM: 26.6
2042 Male, age 76, both hemispheres 30.2
1901 Male, age 80, both hemispheres 27.4
2729 Female, age 91, right hemisphere 26.1
1977 Female, age 85, both hemispheres 25.4
2438 Female, age 94, left hemisphere 25.2
2619 Male, age 74, both hemispheres 25.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 64.1
Min nTPM: 6.3
Std nTPM: 7.6
Median nTPM: 23.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 64.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 46.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 46.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 45.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 41.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 41.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 40.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 40.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 38.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 38.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.1
FF:10153-102I9 76 years, female 35.2
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 27.7
Min nTPM: 11.6
Sample A Female 27.7
Sample B Female 17.9
Sample C Male 27.1
Sample D Male 11.6
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.2
Sample A Female 13.4
Sample B Female 12.1
Sample C Male 12.3
Sample D Male 11.2
Subiculum
nTPM: 15.2
Samples: 4

Max nTPM: 17.5
Min nTPM: 13.9
Sample A Female 17.5
Sample B Female 15.1
Sample C Male 14.4
Sample D Male 13.9
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 24.2
Min nTPM: 13.2
Sample A Female 19.9
Sample B Female 13.2
Sample C Male 24.2
Sample D Male 21.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.7
Sample A Male 15.1
Sample B Male 13.3
Sample C Female 12.7
Sample D Female 15.2
Hippocampal formation
nTPM: 15.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 15.6
Sample C Female 16.7
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68844474 Antisense, RP_050222_01_F11, Mouse strain C57BL/6J (56 days, male) 2.8

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