PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:212.2 nTPM
HPA:212.2 nTPM
FANTOM5:485.6 Scaled Tags Per Million
Pig:231.1 nTPM
Mouse:770.4 nTPM
Allen mouse:20.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 212.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 198.3
2301 Female, age 85, both hemispheres 212.0
2188 Female, age 91, both hemispheres 202.4
2090 Male, age 80, both hemispheres 193.1
1984 Male, age 76, both hemispheres 185.6
Area postrema
nTPM: 195.6
2799 Male, age 61, both hemispheres 204.4
2306 Male, age 80, both hemispheres 201.4
2054 Male, age 76, both hemispheres 181.1
Cuneate nuclei
nTPM: 201.4
2131 Male, age 76, both hemispheres 216.2
2381 Male, age 80, both hemispheres 200.4
2376 Male, age 61, both hemispheres 187.5
Dorsal cochlear nucleus
nTPM: 186.4
2187 Female, age 91, both hemispheres 205.1
2058 Male, age 76, both hemispheres 185.7
2378 Male, age 80, both hemispheres 182.3
2802 Male, age 74, right hemisphere 181.9
2370 Male, age 61, both hemispheres 177.1
Dorsal medullary reticular nucleus
nTPM: 185.3
2040 Female, age 85, both hemispheres 195.9
2088 Male, age 76, both hemispheres 183.8
2373 Male, age 61, both hemispheres 176.1
Dorsal motor vagal complex
nTPM: 191.5
2185 Male, age 76, both hemispheres 206.8
2000 Male, age 74, unknown 202.8
2133 Female, age 91, both hemispheres 196.5
2844 Male, age 55, unknown 195.2
2813 Female, age 72, unknown 192.8
2797 Male, age 61, both hemispheres 192.6
2643 Male, age 74, both hemispheres 177.9
2807 Female, age 85, both hemispheres 167.5
Dorsal tegmental nucleus
nTPM: 188.6
2083 Male, age 80, both hemispheres 200.3
2326 Male, age 74, both hemispheres 189.9
2358 Male, age 61, both hemispheres 186.8
1936 Male, age 76, left hemisphere 177.3
Dorsolateral tegmental area
nTPM: 187.8
2751 Female, age 85, both hemispheres 206.0
2654 Male, age 80, both hemispheres 199.6
2337 Male, age 61, both hemispheres 183.4
2141 Male, age 76, both hemispheres 175.8
2360 Male, age 74, both hemispheres 174.2
Gigantocellular reticular nuclei, medullary
nTPM: 198.1
2314 Male, age 61, both hemispheres 212.3
1876 Female, age 85, both hemispheres 199.9
2022 Male, age 76, right hemisphere 198.6
2387 Female, age 91, both hemispheres 196.0
2310 Male, age 80, both hemispheres 193.4
2462 Male, age 74, both hemispheres 188.6
Gigantocellular reticular nuclei, pars
nTPM: 194.3
2168 Male, age 76, both hemispheres 205.1
2336 Male, age 61, both hemispheres 201.8
2706 Male, age 80, both hemispheres 190.0
2330 Male, age 80, both hemispheres 188.3
2084 Female, age 85, both hemispheres 186.1
Inferior olive
nTPM: 202.5
2563 Male, age 74, both hemispheres 220.8
2628 Female, age 91, both hemispheres 211.2
2085 Female, age 85, both hemispheres 203.4
2178 Male, age 61, both hemispheres 197.9
2379 Male, age 80, both hemispheres 179.2
Kolliker-Fuse nucleus
nTPM: 203.4
2793 Female, age 91, left hemisphere 216.9
2163 Male, age 80, both hemispheres 215.1
2315 Male, age 76, right hemisphere 178.0
Lateral lemniscal nuclei
nTPM: 202.7
2169 Male, age 76, both hemispheres 214.3
2036 Male, age 80, both hemispheres 211.2
2320 Female, age 91, left hemisphere 200.1
2746 Female, age 85, left hemisphere 198.1
2453 Male, age 74, right hemisphere 189.7
Lateral medullary reticular nucleus
nTPM: 206.8
2305 Male, age 74, both hemispheres 225.2
2852 Male, age 80, both hemispheres 209.9
2374 Male, age 61, both hemispheres 204.3
2044 Male, age 76, both hemispheres 202.8
2804 Female, age 91, both hemispheres 202.1
2190 Female, age 85, both hemispheres 196.5
Lateral parabrachial nucleus
nTPM: 202.3
2792 Male, age 76, both hemispheres 215.0
2139 Female, age 85, right hemisphere 206.3
2013 Male, age 80, both hemispheres 206.1
2790 Male, age 61, both hemispheres 182.0
Lateral vestibular nucleus
nTPM: 204.8
2184 Male, age 76, both hemispheres 207.7
2311 Male, age 80, both hemispheres 202.0
Locus coeruleus
nTPM: 182.1
2317 Female, age 72, unknown 190.8
2123 Female, age 91, both hemispheres 186.5
2014 Male, age 55, unknown 184.9
2162 Male, age 80, both hemispheres 183.9
2720 Male, age 74, both hemispheres 178.5
1980 Male, age 76, both hemispheres 175.4
2788 Male, age 74, unknown 174.7
Medial olivary nucleus
nTPM: 207.0
1943 Male, age 61, both hemispheres 209.8
2138 Female, age 91, both hemispheres 208.6
2851 Male, age 80, both hemispheres 207.5
1962 Male, age 76, both hemispheres 202.0
Medial parabrachial nucleus
nTPM: 204.0
2170 Female, age 91, both hemispheres 228.2
2854 Male, age 80, both hemispheres 212.6
2156 Male, age 61, both hemispheres 194.4
2463 Female, age 85, right hemisphere 192.9
2786 Male, age 76, both hemispheres 192.2
Medial periolivary nuclei
nTPM: 200.9
2791 Male, age 74, right hemisphere 209.2
2171 Female, age 85, both hemispheres 207.4
2063 Male, age 76, both hemispheres 206.8
2081 Male, age 80, both hemispheres 192.8
2458 Female, age 91, both hemispheres 188.5
Medial vestibular nucleus
nTPM: 209.3
2624 Male, age 61, both hemispheres 231.2
2801 Male, age 74, both hemispheres 230.7
2803 Female, age 91, both hemispheres 211.0
2093 Male, age 80, both hemispheres 208.1
2134 Male, age 76, both hemispheres 191.3
2743 Female, age 85, both hemispheres 183.2
Motor facial nucleus
nTPM: 201.2
2365 Male, age 74, right hemisphere 225.1
2062 Male, age 76, both hemispheres 205.0
2697 Female, age 85, both hemispheres 200.3
2795 Female, age 91, both hemispheres 196.2
2126 Male, age 61, both hemispheres 192.7
2327 Male, age 80, both hemispheres 187.9
Motor hypoglossal nucleus
nTPM: 202.1
2461 Male, age 61, both hemispheres 224.9
2125 Female, age 91, both hemispheres 211.5
2182 Male, age 80, both hemispheres 207.7
2132 Female, age 85, both hemispheres 202.8
2277 Male, age 76, both hemispheres 163.6
Motor trigeminal nucleus
nTPM: 189.6
2560 Male, age 74, both hemispheres 199.3
2079 Male, age 80, both hemispheres 189.4
2335 Male, age 61, both hemispheres 187.7
2321 Female, age 91, both hemispheres 187.0
2309 Male, age 76, both hemispheres 184.6
Nuclei of the trapezoid body
nTPM: 201.1
1983 Male, age 76, both hemispheres 211.5
2159 Male, age 61, both hemispheres 211.1
2735 Female, age 85, both hemispheres 197.6
2166 Male, age 80, both hemispheres 197.0
2368 Female, age 91, both hemispheres 188.5
Nucleus ambiguus
nTPM: 189.8
2071 Male, age 76, both hemispheres 204.0
2096 Female, age 85, both hemispheres 175.7
Nucleus cuneatus
nTPM: 191.5
2100 Male, age 76, both hemispheres 205.1
2380 Male, age 80, both hemispheres 195.6
2564 Male, age 74, both hemispheres 193.8
2808 Female, age 85, both hemispheres 190.4
2562 Male, age 61, both hemispheres 188.3
2805 Female, age 91, both hemispheres 175.6
Nucleus gracilis
nTPM: 198.1
2627 Male, age 74, both hemispheres 215.1
2382 Male, age 80, both hemispheres 203.6
2299 Female, age 85, both hemispheres 175.8
Nucleus raphe magnus
nTPM: 205.5
2160 Male, age 61, both hemispheres 216.8
2051 Male, age 76, both hemispheres 213.7
2328 Male, age 80, both hemispheres 203.7
2455 Male, age 74, both hemispheres 201.7
2172 Female, age 85, both hemispheres 200.5
2459 Female, age 91, both hemispheres 196.4
Nucleus raphe obscurus
nTPM: 206.2
2845 Female, age 85, midline 214.0
2800 Male, age 61, midline 209.9
2142 Male, age 76, midline 194.8
Nucleus raphe pallidus
nTPM: 207.9
1924 Male, age 61, midline 228.2
2183 Male, age 80, midline 201.1
2145 Male, age 76, midline 194.2
Nucleus tractus solitarii
nTPM: 173.5
2656 Male, age 76, both hemispheres 181.5
2191 Female, age 85, both hemispheres 180.1
2307 Male, age 80, both hemispheres 170.0
2144 Female, age 91, right hemisphere 162.5
Paramedian reticular nucleus
nTPM: 191.5
2050 Female, age 85, both hemispheres 204.8
2057 Male, age 80, both hemispheres 191.5
2313 Male, age 61, both hemispheres 191.5
2052 Male, age 76, both hemispheres 178.4
Parvicellular reticular nuclei
nTPM: 189.8
2119 Male, age 80, both hemispheres 197.5
2095 Male, age 76, both hemispheres 194.1
2558 Male, age 74, both hemispheres 177.6
Parvicellular reticular nuclei, medullary
nTPM: 200.5
2189 Female, age 91, both hemispheres 208.4
2091 Female, age 85, both hemispheres 197.9
2181 Male, age 80, left hemisphere 195.1
Peritrigeminal nucleus
nTPM: 202.7
2136 Male, age 76, both hemispheres 203.8
2179 Male, age 61, both hemispheres 202.9
2067 Female, age 85, both hemispheres 201.5
Pontine nuclei
nTPM: 212.2
2454 Male, age 74, left hemisphere 230.9
1863 Male, age 55, unknown 226.6
2787 Female, age 85, both hemispheres 225.2
2109 Female, age 72, unknown 214.1
1968 Male, age 76, left hemisphere 213.2
2319 Female, age 91, both hemispheres 203.1
2727 Male, age 61, right hemisphere 194.0
2115 Male, age 80, left hemisphere 190.4
Pontine raphe nucleus
nTPM: 188.8
2122 Female, age 85, midline 193.6
2853 Male, age 76, midline 184.1
Posteroventral cochlear nucleus
nTPM: 192.4
2070 Male, age 76, both hemispheres 201.9
2135 Female, age 91, both hemispheres 199.1
2341 Male, age 80, both hemispheres 195.5
2752 Female, age 85, both hemispheres 186.4
2371 Male, age 61, both hemispheres 179.0
Prepositus hypoglossal nucleus
nTPM: 197.0
2855 Female, age 85, right hemisphere 215.9
2086 Male, age 80, both hemispheres 178.0
Principal sensory trigeminal nucleus
nTPM: 201.3
2367 Female, age 91, left hemisphere 204.4
2324 Male, age 76, both hemispheres 204.3
2158 Male, age 61, both hemispheres 203.5
2008 Male, age 80, left hemisphere 193.2
Reticular pontine nucleus, caudal
nTPM: 198.7
2092 Male, age 76, both hemispheres 208.3
2559 Male, age 74, both hemispheres 197.4
2332 Male, age 80, right hemisphere 194.9
2457 Female, age 91, both hemispheres 194.2
Reticular pontine nucleus, oral
nTPM: 202.7
2366 Female, age 91, both hemispheres 207.2
1939 Male, age 80, both hemispheres 204.5
2012 Female, age 85, both hemispheres 201.7
2167 Male, age 76, both hemispheres 200.4
2361 Male, age 74, both hemispheres 199.7
Reticulotegmental nucleus
nTPM: 191.4
2322 Female, age 91, both hemispheres 206.2
2333 Male, age 80, both hemispheres 195.1
2325 Male, age 76, both hemispheres 182.9
2452 Male, age 74, both hemispheres 181.5
Spinal trigeminal nucleus, caudal
nTPM: 203.2
2447 Male, age 76, both hemispheres 214.8
2390 Female, age 91, both hemispheres 209.7
2312 Male, age 61, both hemispheres 202.9
2308 Male, age 80, both hemispheres 197.9
2642 Male, age 74, both hemispheres 190.7
Spinal trigeminal nucleus, interpolar
nTPM: 209.6
2625 Male, age 61, both hemispheres 272.1
2033 Male, age 80, both hemispheres 200.3
2386 Female, age 85, both hemispheres 194.5
2389 Female, age 91, both hemispheres 190.8
2066 Male, age 76, right hemisphere 190.4
Spinal trigeminal nucleus, oral
nTPM: 199.3
2164 Male, age 80, both hemispheres 207.5
1978 Male, age 76, both hemispheres 198.2
2737 Female, age 85, both hemispheres 192.3
Spinal vestibular nucleus
nTPM: 195.4
2186 Female, age 91, both hemispheres 206.6
2748 Male, age 76, both hemispheres 205.6
2806 Female, age 85, both hemispheres 201.7
2780 Male, age 80, both hemispheres 195.4
2796 Male, age 61, both hemispheres 190.5
2384 Male, age 74, both hemispheres 172.2
Subcoeruleus area
nTPM: 191.7
2369 Female, age 85, left hemisphere 208.8
1958 Male, age 80, both hemispheres 195.7
2089 Male, age 76, left hemisphere 193.0
2323 Female, age 91, left hemisphere 191.0
2451 Male, age 74, both hemispheres 169.8
Superior olive
nTPM: 204.3
2364 Male, age 74, right hemisphere 222.4
2020 Male, age 76, both hemispheres 206.8
2329 Male, age 80, right hemisphere 201.1
1875 Female, age 85, both hemispheres 199.9
2561 Female, age 91, both hemispheres 191.3
Superior vestibular nucleus
nTPM: 189.9
2015 Male, age 80, both hemispheres 198.7
2383 Male, age 74, both hemispheres 194.4
2061 Male, age 76, both hemispheres 176.5
Ventral medullary reticular nucleus
nTPM: 196.2
2060 Male, age 76, both hemispheres 203.2
2372 Male, age 61, both hemispheres 189.1
Ventral periolivary nuclei
nTPM: 202.9
2023 Male, age 76, both hemispheres 214.5
2130 Female, age 85, both hemispheres 209.9
2165 Male, age 80, both hemispheres 207.1
2794 Female, age 91, left hemisphere 180.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 197.9
2180 Male, age 61, both hemispheres 203.1
1986 Male, age 76, both hemispheres 199.8
2302 Female, age 91, both hemispheres 199.3
2118 Male, age 80, both hemispheres 194.0
2741 Female, age 85, both hemispheres 193.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 198.3
2840 Female, age 85, both hemispheres 208.4
1959 Male, age 76, both hemispheres 205.2
2161 Male, age 80, both hemispheres 200.0
2449 Male, age 74, both hemispheres 198.2
2456 Female, age 91, both hemispheres 194.6
2359 Male, age 61, both hemispheres 183.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 485.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 313.5
FF:10165-103B3 76 years, female 317.5
FF:10182-103D2 60 years, female 309.6
Medulla oblongata
Scaled Tags Per Million: 378.3
FF:10038-101F2 18-64 years, mixed 500.9
FF:10155-103A2 76 years, female 357.1
FF:10174-103C3 60 years, female 277.0
Pons
Scaled Tags Per Million: 485.6
FF:10033-101E6 18-54 years, mixed 485.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 231.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 231.1
Samples: 4

Max nTPM: 272.1
Min nTPM: 185.4
Sample A Female 216.6
Sample B Female 185.4
Sample C Male 250.2
Sample D Male 272.1
Pons
nTPM: 185.9
Samples: 4

Max nTPM: 253.9
Min nTPM: 133.6
Sample A Female 177.0
Sample B Female 133.6
Sample C Male 179.1
Sample D Male 253.9

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 770.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 770.4
Samples: 4

Max nTPM: 831.6
Min nTPM: 727.8
Sample A Male 765.4
Sample B Male 727.8
Sample C Female 831.6
Sample D Female 756.9

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 20.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 19.7
544902 Antisense, RP_040420_01_H11, Mouse strain C57BL/6J (56 days, male) 20.9
75694901 Antisense, RP_060518_04_A09, Mouse strain C57BL/6J (56 days, male) 18.5
Pons
Expression energy: 20.1
544902 Antisense, RP_040420_01_H11, Mouse strain C57BL/6J (56 days, male) 21.0
75694901 Antisense, RP_060518_04_A09, Mouse strain C57BL/6J (56 days, male) 19.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.