HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:38.2 nTPM
HPA:38.2 nTPM
GTEx:75.3 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:39.1 nTPM
Mouse:48.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.2
Sample id Sample description nTPM
Hippocampus
nTPM: 38.2
2621 Female, age 67, right hemisphere 63.6
2529 Female, age 94, left hemisphere 61.0
2148 Female, age 91, left hemisphere 36.4
1911 Female, age 85, right hemisphere 28.4
1898 Male, age 80, left hemisphere 24.6
1855 Male, age 76, left hemisphere 15.2
Dentate gyrus
nTPM: 28.3
2530 Female, age 94, left hemisphere 49.0
2531 Female, age 67, both hemispheres 43.6
1927 Female, age 91, both hemispheres 36.2
2010 Male, age 76, both hemispheres 20.3
2528 Male, age 74, both hemispheres 13.6
2246 Female, age 85, both hemispheres 7.1
Entorhinal gyrus
nTPM: 21.0
2613 Female, age 94, left hemisphere 29.5
2117 Female, age 91, right hemisphere 27.8
2764 Male, age 80, right hemisphere 23.7
1787 Male, age 76, left hemisphere 19.6
2686 Male, age 75, right hemisphere 17.5
1938 Female, age 85, left hemisphere 7.6
Hippocampus, CA1
nTPM: 20.9
2749 Male, age 80, left hemisphere 37.4
2527 Male, age 74, both hemispheres 34.3
1873 Female, age 85, both hemispheres 16.6
2082 Female, age 91, right hemisphere 16.2
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 31.7
2437 Female, age 94, left hemisphere 51.7
1963 Male, age 80, left hemisphere 49.8
1892 Male, age 76, both hemispheres 33.7
2249 Male, age 74, both hemispheres 24.2
2113 Female, age 91, right hemisphere 20.7
1940 Female, age 85, left hemisphere 9.9
Hippocampus, CA3
nTPM: 27.7
2861 Female, age 67, both hemispheres 43.7
1867 Male, age 76, both hemispheres 34.9
2620 Female, age 94, left hemisphere 34.5
2137 Male, age 80, left hemisphere 33.8
1891 Female, age 85, both hemispheres 15.9
2436 Male, age 74, both hemispheres 3.5
Parahippocampal cortex
nTPM: 18.4
2245 Female, age 91, both hemispheres 41.4
2622 Female, age 67, right hemisphere 28.2
1990 Female, age 91, right hemisphere 24.1
2250 Female, age 67, right hemisphere 23.3
2018 Male, age 76, both hemispheres 18.3
2532 Female, age 72, left hemisphere 15.6
2693 Female, age 94, both hemispheres 12.1
2692 Male, age 74, both hemispheres 11.4
1933 Female, age 85, both hemispheres 6.0
1850 Male, age 80, both hemispheres 3.6
Perirhinal gyrus
nTPM: 11.6
2521 Female, age 94, right hemisphere 26.7
1847 Female, age 91, left hemisphere 16.0
1794 Male, age 80, right hemisphere 9.6
2848 Male, age 76, right hemisphere 3.3
1841 Female, age 85, right hemisphere 2.2
Subiculum
nTPM: 23.9
2438 Female, age 94, left hemisphere 31.7
1901 Male, age 80, both hemispheres 28.1
2619 Male, age 74, both hemispheres 26.2
2729 Female, age 91, right hemisphere 20.1
1977 Female, age 85, both hemispheres 19.4
2042 Male, age 76, both hemispheres 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.3
Samples: 197

Max nTPM: 239.4
Min nTPM: 5.5
Std nTPM: 33.7
Median nTPM: 68.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 239.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 185.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 161.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 157.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 156.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 155.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 154.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 144.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 138.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 136.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 135.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10153-102I9 76 years, female 21.2
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 39.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.4
Samples: 4

Max nTPM: 46.5
Min nTPM: 23.4
Sample A Female 45.5
Sample B Female 34.0
Sample C Male 46.5
Sample D Male 23.4
Entorhinal cortex
nTPM: 39.1
Samples: 4

Max nTPM: 41.9
Min nTPM: 35.6
Sample A Female 37.5
Sample B Female 41.4
Sample C Male 41.9
Sample D Male 35.6
Subiculum
nTPM: 27.1
Samples: 4

Max nTPM: 37.9
Min nTPM: 20.3
Sample A Female 37.9
Sample B Female 21.6
Sample C Male 28.4
Sample D Male 20.3
Ventral hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 45.4
Min nTPM: 20.9
Sample A Female 32.1
Sample B Female 20.9
Sample C Male 45.4
Sample D Male 40.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 55.7
Min nTPM: 41.7
Sample A Male 55.7
Sample B Male 47.2
Sample C Female 41.7
Sample D Female 41.7
Hippocampal formation
nTPM: 48.2
Samples: 4

Max nTPM: 52.1
Min nTPM: 43.7
Sample A Male 43.7
Sample B Male 49.8
Sample C Female 52.1
Sample D Female 47.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
70723465 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 2.0
73512185 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 1.5

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