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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM EPIDIDYMIS
ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:139.8 nTPM
FANTOM5:160.4 Scaled Tags Per Million
Pig:135.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001097
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 139.8
Samples: 246

Max nTPM: 263.5
Min nTPM: 52.6
Std nTPM: 31.4
Median nTPM: 140.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 263.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 214.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 209.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 209.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 202.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 202.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 200.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 199.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 197.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 195.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 195.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 194.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 193.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 191.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 190.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 188.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 188.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 187.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 187.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 184.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 183.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 181.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 180.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 179.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 178.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 177.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 174.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 174.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 174.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 174.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 174.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 174.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 173.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 172.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 172.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 171.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 171.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 170.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 170.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 169.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 169.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 169.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 169.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 168.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 168.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 168.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 167.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 166.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 166.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 165.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 165.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 164.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 164.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 163.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 163.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 163.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 162.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 161.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 160.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 158.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 158.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 157.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 157.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 156.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 156.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 156.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 156.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 156.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 155.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 155.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 154.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 154.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 153.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 153.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 153.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 153.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 152.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 152.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 152.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 151.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 151.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 151.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 151.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 150.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 150.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 149.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 149.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 149.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 149.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 148.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 148.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 148.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 148.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 147.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 147.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 147.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 147.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 146.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 146.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 145.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 145.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 145.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 145.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 145.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 144.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 144.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 144.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 143.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 143.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 143.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 142.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 142.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 142.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 141.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 141.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 141.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 140.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 140.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 140.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 139.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 139.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 138.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 138.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 138.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 138.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 137.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 137.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 136.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 135.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 135.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 135.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 135.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 135.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 134.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 133.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 133.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 132.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 132.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 132.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 132.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 132.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 132.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 130.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 130.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 130.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 130.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 130.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 130.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 130.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 129.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 129.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 129.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 129.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 129.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 129.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 127.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 127.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 126.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 126.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 126.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 126.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 125.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 125.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 125.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 125.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 122.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 122.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 121.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 121.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 121.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 121.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 121.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 121.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 121.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 120.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 120.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 118.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 118.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 117.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 117.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 117.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 116.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 115.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 115.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 115.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 114.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 114.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 113.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 113.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 113.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 113.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 113.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 112.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 112.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 111.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 111.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 110.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 110.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 110.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 109.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 109.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 109.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 108.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 108.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 107.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 107.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 105.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 104.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 104.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 103.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 103.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 103.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 102.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 102.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 100.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 100.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 99.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 98.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 96.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 96.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 95.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 94.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 94.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 93.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 90.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 89.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 88.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 85.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 84.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 82.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 78.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 78.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 77.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 77.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 77.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 74.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 160.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 160.4
FF:10164-103B2 76 years, female 160.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 135.3
Pig sample Sample description nTPM
Caudate
nTPM: 135.3
Samples: 4

Max nTPM: 163.1
Min nTPM: 94.7
Sample A Female 94.7
Sample B Female 163.1
Sample C Male 160.6
Sample D Male 122.8

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