HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:68.9 nTPM
HPA:68.9 nTPM
GTEx:90.3 nTPM
FANTOM5:87.5 Scaled Tags Per Million
Pig:38.4 nTPM
Mouse:26.4 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051200
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.9
Sample id Sample description nTPM
Hippocampus
nTPM: 61.1
2529 Female, age 94, left hemisphere 67.3
1898 Male, age 80, left hemisphere 62.4
2621 Female, age 67, right hemisphere 61.8
1911 Female, age 85, right hemisphere 61.7
1855 Male, age 76, left hemisphere 57.6
2148 Female, age 91, left hemisphere 55.5
Dentate gyrus
nTPM: 61.4
2530 Female, age 94, left hemisphere 93.1
2010 Male, age 76, both hemispheres 63.0
2528 Male, age 74, both hemispheres 57.1
2531 Female, age 67, both hemispheres 54.4
2246 Female, age 85, both hemispheres 53.1
1927 Female, age 91, both hemispheres 48.0
Entorhinal gyrus
nTPM: 61.9
2117 Female, age 91, right hemisphere 80.7
2686 Male, age 75, right hemisphere 67.3
2764 Male, age 80, right hemisphere 63.7
2613 Female, age 94, left hemisphere 55.1
1938 Female, age 85, left hemisphere 54.5
1787 Male, age 76, left hemisphere 50.4
Hippocampus, CA1
nTPM: 53.2
2527 Male, age 74, both hemispheres 60.0
1873 Female, age 85, both hemispheres 55.4
2749 Male, age 80, left hemisphere 54.8
2082 Female, age 91, right hemisphere 51.6
2045 Male, age 76, both hemispheres 44.4
Hippocampus, CA2
nTPM: 60.3
1963 Male, age 80, left hemisphere 74.3
2437 Female, age 94, left hemisphere 67.7
2249 Male, age 74, both hemispheres 60.3
2113 Female, age 91, right hemisphere 56.0
1940 Female, age 85, left hemisphere 54.5
1892 Male, age 76, both hemispheres 49.3
Hippocampus, CA3
nTPM: 51.6
1891 Female, age 85, both hemispheres 64.1
1867 Male, age 76, both hemispheres 56.1
2861 Female, age 67, both hemispheres 50.7
2436 Male, age 74, both hemispheres 47.8
2137 Male, age 80, left hemisphere 47.7
2620 Female, age 94, left hemisphere 43.3
Parahippocampal cortex
nTPM: 53.4
2692 Male, age 74, both hemispheres 65.6
2532 Female, age 72, left hemisphere 61.6
1990 Female, age 91, right hemisphere 55.5
1850 Male, age 80, both hemispheres 55.0
2018 Male, age 76, both hemispheres 52.9
2245 Female, age 91, both hemispheres 52.7
1933 Female, age 85, both hemispheres 50.0
2693 Female, age 94, both hemispheres 49.1
2250 Female, age 67, right hemisphere 45.9
2622 Female, age 67, right hemisphere 45.5
Perirhinal gyrus
nTPM: 45.3
2521 Female, age 94, right hemisphere 47.2
1794 Male, age 80, right hemisphere 46.9
1847 Female, age 91, left hemisphere 45.2
2848 Male, age 76, right hemisphere 44.1
1841 Female, age 85, right hemisphere 43.3
Subiculum
nTPM: 68.9
2042 Male, age 76, both hemispheres 85.6
1901 Male, age 80, both hemispheres 73.9
2438 Female, age 94, left hemisphere 73.1
1977 Female, age 85, both hemispheres 62.8
2729 Female, age 91, right hemisphere 59.7
2619 Male, age 74, both hemispheres 58.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 90.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.3
Samples: 197

Max nTPM: 320.7
Min nTPM: 8.1
Std nTPM: 47.5
Median nTPM: 82.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 320.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 247.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 222.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 218.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 209.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 198.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 197.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 191.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 188.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 186.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 183.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 87.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 87.5
FF:10169-103B7 60 years, female 92.0
FF:10153-102I9 76 years, female 83.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 24.5
Min nTPM: 15.3
Sample A Female 24.5
Sample B Female 16.5
Sample C Male 17.9
Sample D Male 15.3
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 48.6
Min nTPM: 33.4
Sample A Female 48.6
Sample B Female 35.0
Sample C Male 36.7
Sample D Male 33.4
Subiculum
nTPM: 28.9
Samples: 4

Max nTPM: 41.9
Min nTPM: 22.2
Sample A Female 41.9
Sample B Female 24.1
Sample C Male 22.2
Sample D Male 27.2
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 24.0
Min nTPM: 17.6
Sample A Female 22.5
Sample B Female 17.6
Sample C Male 24.0
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.4
Samples: 4

Max nTPM: 28.9
Min nTPM: 23.6
Sample A Male 28.9
Sample B Male 28.8
Sample C Female 24.4
Sample D Female 23.6
Hippocampal formation
nTPM: 25.2
Samples: 4

Max nTPM: 27.6
Min nTPM: 23.5
Sample A Male 27.6
Sample B Male 23.5
Sample C Female 25.4
Sample D Female 24.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68744432 Antisense, RP_050203_02_H07, Mouse strain C57BL/6J (56 days, male) 2.9

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