HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:105.2 nTPM
HPA:105.2 nTPM
GTEx:94.4 nTPM
FANTOM5:162.3 Scaled Tags Per Million
Pig:25.6 nTPM
Mouse:253.7 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001550Antibody CAB010102
Glial cells MediumHigh
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.2
Sample id Sample description nTPM
Hippocampus
nTPM: 89.4
1855 Male, age 76, left hemisphere 95.6
2529 Female, age 94, left hemisphere 92.8
1898 Male, age 80, left hemisphere 91.2
1911 Female, age 85, right hemisphere 89.1
2621 Female, age 67, right hemisphere 84.8
2148 Female, age 91, left hemisphere 83.1
Dentate gyrus
nTPM: 86.4
2010 Male, age 76, both hemispheres 94.5
2530 Female, age 94, left hemisphere 93.5
2528 Male, age 74, both hemispheres 87.7
2246 Female, age 85, both hemispheres 83.2
1927 Female, age 91, both hemispheres 81.2
2531 Female, age 67, both hemispheres 78.5
Entorhinal gyrus
nTPM: 86.5
2117 Female, age 91, right hemisphere 107.1
1787 Male, age 76, left hemisphere 88.5
2764 Male, age 80, right hemisphere 85.7
1938 Female, age 85, left hemisphere 84.3
2613 Female, age 94, left hemisphere 77.0
2686 Male, age 75, right hemisphere 76.5
Hippocampus, CA1
nTPM: 86.2
2527 Male, age 74, both hemispheres 89.6
2045 Male, age 76, both hemispheres 86.6
2749 Male, age 80, left hemisphere 86.2
1873 Female, age 85, both hemispheres 85.6
2082 Female, age 91, right hemisphere 82.9
Hippocampus, CA2
nTPM: 97.4
2249 Male, age 74, both hemispheres 119.2
1963 Male, age 80, left hemisphere 106.7
1940 Female, age 85, left hemisphere 93.8
1892 Male, age 76, both hemispheres 88.6
2113 Female, age 91, right hemisphere 88.2
2437 Female, age 94, left hemisphere 88.0
Hippocampus, CA3
nTPM: 105.2
2436 Male, age 74, both hemispheres 198.9
1867 Male, age 76, both hemispheres 106.1
1891 Female, age 85, both hemispheres 96.9
2137 Male, age 80, left hemisphere 85.1
2861 Female, age 67, both hemispheres 73.0
2620 Female, age 94, left hemisphere 71.0
Parahippocampal cortex
nTPM: 84.0
2018 Male, age 76, both hemispheres 100.5
1990 Female, age 91, right hemisphere 87.8
1850 Male, age 80, both hemispheres 86.3
2692 Male, age 74, both hemispheres 86.3
1933 Female, age 85, both hemispheres 85.5
2532 Female, age 72, left hemisphere 82.6
2250 Female, age 67, right hemisphere 80.7
2693 Female, age 94, both hemispheres 78.4
2245 Female, age 91, both hemispheres 78.1
2622 Female, age 67, right hemisphere 73.4
Perirhinal gyrus
nTPM: 78.8
2848 Male, age 76, right hemisphere 81.7
1794 Male, age 80, right hemisphere 78.9
2521 Female, age 94, right hemisphere 78.6
1847 Female, age 91, left hemisphere 78.2
1841 Female, age 85, right hemisphere 76.7
Subiculum
nTPM: 92.3
1901 Male, age 80, both hemispheres 99.4
2042 Male, age 76, both hemispheres 98.8
2729 Female, age 91, right hemisphere 89.9
2619 Male, age 74, both hemispheres 89.3
1977 Female, age 85, both hemispheres 88.9
2438 Female, age 94, left hemisphere 87.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.4
Samples: 197

Max nTPM: 261.8
Min nTPM: 21.3
Std nTPM: 47.9
Median nTPM: 78.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 261.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 229.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 224.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 220.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 215.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 215.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 213.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 205.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 202.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 197.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 196.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 162.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.3
FF:10153-102I9 76 years, female 243.1
FF:10169-103B7 60 years, female 81.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 14.5
Sample A Female 30.7
Sample B Female 28.8
Sample C Male 28.4
Sample D Male 14.5
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 42.7
Min nTPM: 15.7
Sample A Female 16.5
Sample B Female 42.7
Sample C Male 15.7
Sample D Male 19.4
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 24.5
Min nTPM: 11.9
Sample A Female 24.5
Sample B Female 22.0
Sample C Male 13.9
Sample D Male 11.9
Ventral hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 29.9
Min nTPM: 21.3
Sample A Female 22.9
Sample B Female 29.9
Sample C Male 24.9
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 253.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 173.3
Samples: 4

Max nTPM: 206.0
Min nTPM: 130.0
Sample A Male 206.0
Sample B Male 175.7
Sample C Female 181.6
Sample D Female 130.0
Hippocampal formation
nTPM: 253.7
Samples: 4

Max nTPM: 264.9
Min nTPM: 242.6
Sample A Male 244.0
Sample B Male 242.6
Sample C Female 263.3
Sample D Female 264.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69014434 Antisense, RP_050310_01_B02, Mouse strain C57BL/6J (56 days, male) 7.6
72103831 Antisense, RP_051017_03_D11, Mouse strain C57BL/6J (56 days, male) 7.4

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The Human Protein Atlas

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