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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:554.0 nTPM
GTEx:554.0 nTPM
FANTOM5:335.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045101
Squamous epithelial cells High



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 554.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 554.0
Samples: 156

Max nTPM: 1497.2
Min nTPM: 285.6
Std nTPM: 141.1
Median nTPM: 526.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 1497.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 1096.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 971.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 886.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 841.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 807.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 806.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 792.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 791.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 769.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 760.2
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 733.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 730.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 716.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 707.7
GTEX-16NPV-2526-SM-6M483 50-59 years, female 705.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 690.6
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 685.6
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 683.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 680.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 678.9
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 658.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 657.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 656.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 647.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 643.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 641.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 641.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 638.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 637.6
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 628.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 626.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 621.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 619.6
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 615.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 614.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 606.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 606.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 604.6
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 603.5
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 600.0
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 599.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 596.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 595.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 595.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 593.7
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 593.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 590.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 589.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 583.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 576.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 574.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 571.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 570.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 569.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 568.3
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 563.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 561.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 559.8
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 557.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 553.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 553.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 551.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 550.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 547.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 547.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 545.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 540.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 540.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 539.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 537.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 537.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 535.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 534.7
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 529.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 529.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 528.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 526.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 526.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 525.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 525.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 524.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 524.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 524.3
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 523.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 522.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 521.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 521.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 521.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 519.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 519.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 516.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 516.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 513.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 511.6
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 511.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 510.8
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 509.5
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 506.7
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 501.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 500.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 499.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 498.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 497.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 497.1
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 493.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 493.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 490.5
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 488.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 485.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 484.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 483.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 480.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 478.0
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 477.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 477.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 477.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 474.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 474.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 471.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 468.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 459.3
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 458.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 457.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 452.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 451.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 444.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 443.8
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 439.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 439.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 438.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 437.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 432.8
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 431.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 430.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 429.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 425.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 424.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 423.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 420.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 412.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 412.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 412.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 411.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 411.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 409.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 408.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 403.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 403.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 401.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 386.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 384.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 375.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 323.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 313.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 285.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 335.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 335.1
FF:10204-103F6 68 years, female 335.1

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The Human Protein Atlas project is funded
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