AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		5.420
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.2 nTPM
HPA:51.2 nTPM
GTEx:111.7 nTPM
FANTOM5:117.8 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:64.9 nTPM
Allen mouse:2.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA005835
Amygdala mean intensity 5.420
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 2.281
Basal medial amygdaloid nucleus 2.378
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 2.438
Cortical amygdala 5.420
Central amygdala 2.910
Medial amygdaloid nucleus 0.412

AMYGDALA - HPA Brain RNA-seq
Max nTPM 51.2
Sample id Sample description nTPM
Amygdala
nTPM: 51.2
2814 Male, age 76, right hemisphere 52.8
2695 Female, age 67, right hemisphere 52.0
1987 Female, age 91, left hemisphere 51.2
2517 Female, age 94, left hemisphere 50.3
2514 Male, age 75, right hemisphere 49.9
Basal amygdala
nTPM: 48.0
2609 Male, age 75, right hemisphere 52.5
2110 Male, age 80, left hemisphere 48.9
2243 Female, age 91, right hemisphere 48.5
1955 Male, age 76, both hemispheres 47.3
2685 Female, age 94, left hemisphere 47.3
2827 Female, age 67, right hemisphere 43.2
Central amygdala
nTPM: 50.4
1905 Male, age 76, both hemispheres 52.3
2826 Female, age 94, left hemisphere 51.9
2515 Male, age 75, right hemisphere 50.3
2239 Male, age 80, left hemisphere 49.6
2701 Female, age 91, right hemisphere 47.8
Corticomedial amygdala
nTPM: 47.7
2428 Male, age 75, right hemisphere 50.5
2829 Male, age 80, left hemisphere 49.4
2242 Female, age 91, right hemisphere 48.1
2429 Female, age 94, left hemisphere 47.2
2240 Male, age 76, both hemispheres 47.1
2535 Female, age 67, right hemisphere 44.0
Lateral amygdala
nTPM: 49.2
2516 Male, age 75, right hemisphere 52.8
2534 Female, age 94, left hemisphere 51.7
1883 Male, age 76, both hemispheres 50.8
2255 Female, age 91, right hemisphere 48.3
2256 Male, age 80, left hemisphere 46.7
2830 Female, age 67, right hemisphere 44.9
Stria terminalis, bed nucleus
nTPM: 48.3
2201 Male, age 74, unknown 49.2
1974 Female, age 91, both hemispheres 48.4
2486 Female, age 94, both hemispheres 47.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 111.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 111.7
Samples: 152

Max nTPM: 209.4
Min nTPM: 51.7
Std nTPM: 29.0
Median nTPM: 108.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 209.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 200.7
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 194.3
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 191.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 184.7
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 178.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 177.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 173.9
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 164.0
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 163.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 161.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 117.8
FF:10151-102I7 76 years, female 117.8

AMYGDALA - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Amygdala
nTPM: 11.5
Samples: 4

Max nTPM: 13.8
Min nTPM: 8.9
Sample A Female 13.8
Sample B Female 11.2
Sample C Male 12.2
Sample D Male 8.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 64.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 64.9
Samples: 4

Max nTPM: 69.6
Min nTPM: 61.5
Sample A Male 62.5
Sample B Male 69.6
Sample C Female 65.9
Sample D Female 61.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.9
69671863 Antisense, RP_050428_02_E05, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.