AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		72.818
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:176.7 nTPM
HPA:176.7 nTPM
GTEx:283.1 nTPM
FANTOM5:295.1 Scaled Tags Per Million
Pig:201.2 nTPM
Mouse:753.2 nTPM
Allen mouse:26.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA063679
Amygdala mean intensity 72.818
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 40.095
Basal medial amygdaloid nucleus 54.926
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 49.291
Cortical amygdala 72.818
Central amygdala 40.599
Medial amygdaloid nucleus 41.267

AMYGDALA - HPA Brain RNA-seq
Max nTPM 176.7
Sample id Sample description nTPM
Amygdala
nTPM: 36.5
2517 Female, age 94, left hemisphere 93.1
1987 Female, age 91, left hemisphere 70.3
2514 Male, age 75, right hemisphere 19.3
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 172.3
2243 Female, age 91, right hemisphere 334.0
2110 Male, age 80, left hemisphere 222.4
2685 Female, age 94, left hemisphere 221.9
2827 Female, age 67, right hemisphere 119.0
2609 Male, age 75, right hemisphere 76.7
1955 Male, age 76, both hemispheres 59.7
Central amygdala
nTPM: 56.9
2239 Male, age 80, left hemisphere 168.6
2826 Female, age 94, left hemisphere 116.2
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
Corticomedial amygdala
nTPM: 176.7
2242 Female, age 91, right hemisphere 329.5
2829 Male, age 80, left hemisphere 288.2
2535 Female, age 67, right hemisphere 171.2
2429 Female, age 94, left hemisphere 156.8
2428 Male, age 75, right hemisphere 60.3
2240 Male, age 76, both hemispheres 54.4
Lateral amygdala
nTPM: 65.5
2534 Female, age 94, left hemisphere 184.8
2256 Male, age 80, left hemisphere 144.9
1883 Male, age 76, both hemispheres 24.2
2830 Female, age 67, right hemisphere 18.7
2255 Female, age 91, right hemisphere 18.4
2516 Male, age 75, right hemisphere 2.1
Stria terminalis, bed nucleus
nTPM: 151.9
1974 Female, age 91, both hemispheres 273.6
2486 Female, age 94, both hemispheres 182.1
2201 Male, age 74, unknown 0.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 283.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 283.1
Samples: 152

Max nTPM: 707.6
Min nTPM: 5.4
Std nTPM: 179.1
Median nTPM: 256.0
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 707.6
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 705.6
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 666.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 635.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 627.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 627.6
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 621.5
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 610.1
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 606.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 598.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 589.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 295.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 295.1
FF:10151-102I7 76 years, female 295.1

AMYGDALA - Pig RNA-seqi
Average nTPM 201.2
Pig sample Sample description nTPM
Amygdala
nTPM: 201.2
Samples: 4

Max nTPM: 336.9
Min nTPM: 81.3
Sample A Female 336.9
Sample B Female 81.3
Sample C Male 194.6
Sample D Male 192.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 753.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 753.2
Samples: 4

Max nTPM: 777.7
Min nTPM: 727.0
Sample A Male 777.7
Sample B Male 761.1
Sample C Female 746.9
Sample D Female 727.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 26.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 26.9
69014470 Antisense, RP_050310_01_B09, Mouse strain C57BL/6J (56 days, male) 27.1
75081210 Antisense, RP_060412_01_A03, Mouse strain C57BL/6J (56 days, male) 26.7
70436317 Antisense, RP_050310_01_B09, Mouse strain C57BL/6J (56 days, male) 22.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.