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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 526.8
Min nTPM: 180.5
Std nTPM: 66.3
Median nTPM:
352_1
62 years, male
526.8
375_1
74 years, female
482.4
218_1
71 years, female
470.6
354_1
81 years, female
465.6
229_1
69 years, female
447.7
319_1
81 years, male
438.3
6_1
73 years, female
426.1
172_1
72 years, female
420.5
379_1
60 years, male
413.9
243_1
75 years, male
408.3
347_1
72 years, male
408.1
386_1
76 years, male
408.0
335_1
73 years, female
400.6
237_1
82 years, male
394.6
316_1
62 years, male
386.6
414_1
84 years, female
382.3
322_1
76 years, male
378.8
350_1
84 years, female
376.9
425_1
59 years, female
374.2
377_1
82 years, female
372.2
246_1
77 years, male
364.2
266_1
85 years, male
363.9
163_1
78 years, male
363.8
349_1
83 years, male
363.4
356_1
87 years, female
360.5
415_1
77 years, female
358.2
355_1
70 years, female
354.8
286_1
68 years, female
352.2
376_1
75 years, female
346.6
353_1
82 years, female
338.0
254_1
77 years, female
337.6
292_1
71 years, male
337.0
351_1
91 years, male
334.0
265_1
87 years, male
333.6
324_1
76 years, male
333.6
321_1
62 years, female
332.0
177_1
74 years, male
331.2
413_1
59 years, female
329.1
318_1
68 years, male
329.0
317_1
60 years, male
328.1
320_1
89 years, female
326.3
406_1
79 years, male
323.5
389_1
86 years, female
320.5
35_1
74 years, female
320.4
142_1
61 years, female
320.4
447_1
81 years, male
319.5
153_1
70 years, female
316.6
405_1
91 years, male
314.5
173_1
67 years, male
311.9
394_1
75 years, female
311.0
480_1
63 years, male
310.8
396_1
62 years, male
310.1
251_1
78 years, male
310.0
189_1
76 years, male
308.2
490_1
67 years, female
306.9
162_1
79 years, female
301.8
4_1
88 years, female
301.5
503_1
68 years, male
301.4
293_1
68 years, female
300.3
468_1
89 years, male
299.7
315_1
62 years, female
299.6
99_1
64 years, male
298.6
313_1
79 years, female
297.9
9_1
66 years, female
297.5
526_1
61 years, male
295.1
452_1
88 years, female
294.5
404_1
82 years, female
293.7
518_1
75 years, female
293.6
17_1
71 years, male
292.7
137_1
83 years, male
290.3
264_1
73 years, female
287.9
126_1
63 years, male
286.1
43_1
64 years, female
285.0
42_1
85 years, male
284.0
120_1
70 years, female
280.6
466_1
57 years, female
277.7
348_1
84 years, male
275.5
217_1
76 years, male
274.6
117_1
61 years, male
274.5
499_1
55 years, female
271.2
145_1
84 years, male
269.9
115_1
83 years, male
269.6
32_1
67 years, male
267.1
81_1
67 years, male
264.3
506_1
65 years, male
263.6
384_1
83 years, male
261.4
18_1
88 years, male
259.2
288_1
66 years, female
259.0
291_1
76 years, male
249.0
295_1
61 years, female
248.3
307_1
66 years, female
248.1
311_1
78 years, male
239.7
517_1
88 years, male
237.6
491_1
89 years, female
235.9
139_1
64 years, female
234.0
41_1
94 years, female
231.1
501_1
88 years, male
231.0
2_1
77 years, female
226.3
109_1
81 years, female
219.8
314_1
67 years, male
204.7
495_1
57 years, female
203.6
119_1
70 years, female
202.2
149_1
88 years, male
200.3
308_1
70 years, female
192.0
89_1
63 years, male
180.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.