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RPS16
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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:830.8 nTPM
HPA:830.8 nTPM
FANTOM5:275.1 Scaled Tags Per Million
Pig:684.7 nTPM
Allen mouse:7.3 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 830.8
Sample id Sample description nTPM
Area postrema
nTPM: 821.4
2799 Male, age 61, both hemispheres 851.4
2306 Male, age 80, both hemispheres 846.7
2054 Male, age 76, both hemispheres 766.2
Cuneate nuclei
nTPM: 779.9
2381 Male, age 80, both hemispheres 795.3
2376 Male, age 61, both hemispheres 787.2
2131 Male, age 76, both hemispheres 757.2
Dorsal medullary reticular nucleus
nTPM: 778.8
2373 Male, age 61, both hemispheres 794.8
2040 Female, age 85, both hemispheres 784.3
2088 Male, age 76, both hemispheres 757.2
Dorsal motor vagal complex
nTPM: 802.4
2797 Male, age 61, both hemispheres 888.5
2643 Male, age 74, both hemispheres 836.3
2807 Female, age 85, both hemispheres 812.5
2185 Male, age 76, both hemispheres 783.1
2133 Female, age 91, both hemispheres 781.3
2813 Female, age 72, unknown 778.2
2000 Male, age 74, unknown 770.2
2844 Male, age 55, unknown 768.8
Gigantocellular reticular nuclei, medullary
nTPM: 787.0
2314 Male, age 61, both hemispheres 836.8
2387 Female, age 91, both hemispheres 792.6
2022 Male, age 76, right hemisphere 784.2
1876 Female, age 85, both hemispheres 780.8
2310 Male, age 80, both hemispheres 772.8
2462 Male, age 74, both hemispheres 755.0
Gigantocellular reticular nuclei, pars
nTPM: 768.6
2336 Male, age 61, both hemispheres 778.2
2330 Male, age 80, both hemispheres 770.9
2084 Female, age 85, both hemispheres 769.5
2706 Male, age 80, both hemispheres 768.6
2168 Male, age 76, both hemispheres 755.5
Inferior olive
nTPM: 818.8
2628 Female, age 91, both hemispheres 841.1
2178 Male, age 61, both hemispheres 819.0
2563 Male, age 74, both hemispheres 818.1
2379 Male, age 80, both hemispheres 812.3
2085 Female, age 85, both hemispheres 803.7
Lateral medullary reticular nucleus
nTPM: 808.2
2374 Male, age 61, both hemispheres 827.0
2852 Male, age 80, both hemispheres 822.9
2804 Female, age 91, both hemispheres 820.5
2190 Female, age 85, both hemispheres 817.4
2044 Male, age 76, both hemispheres 782.2
2305 Male, age 74, both hemispheres 779.4
Medial vestibular nucleus
nTPM: 781.8
2624 Male, age 61, both hemispheres 806.3
2803 Female, age 91, both hemispheres 797.5
2801 Male, age 74, both hemispheres 788.4
2093 Male, age 80, both hemispheres 774.9
2743 Female, age 85, both hemispheres 767.8
2134 Male, age 76, both hemispheres 755.9
Motor hypoglossal nucleus
nTPM: 786.2
2182 Male, age 80, both hemispheres 817.1
2132 Female, age 85, both hemispheres 807.4
2125 Female, age 91, both hemispheres 791.7
2461 Male, age 61, both hemispheres 764.0
2277 Male, age 76, both hemispheres 750.7
Nucleus ambiguus
nTPM: 779.9
2071 Male, age 76, both hemispheres 813.5
2096 Female, age 85, both hemispheres 746.3
Nucleus cuneatus
nTPM: 801.6
2808 Female, age 85, both hemispheres 830.4
2805 Female, age 91, both hemispheres 816.0
2380 Male, age 80, both hemispheres 813.6
2564 Male, age 74, both hemispheres 796.4
2562 Male, age 61, both hemispheres 790.6
2100 Male, age 76, both hemispheres 762.5
Nucleus gracilis
nTPM: 830.8
2382 Male, age 80, both hemispheres 842.7
2299 Female, age 85, both hemispheres 832.7
2627 Male, age 74, both hemispheres 817.0
Nucleus raphe magnus
nTPM: 764.4
2051 Male, age 76, both hemispheres 786.5
2328 Male, age 80, both hemispheres 770.9
2459 Female, age 91, both hemispheres 767.3
2172 Female, age 85, both hemispheres 757.3
2455 Male, age 74, both hemispheres 756.9
2160 Male, age 61, both hemispheres 747.3
Nucleus raphe obscurus
nTPM: 816.1
2845 Female, age 85, midline 826.3
2142 Male, age 76, midline 811.4
2800 Male, age 61, midline 810.5
Nucleus raphe pallidus
nTPM: 815.6
1924 Male, age 61, midline 836.5
2145 Male, age 76, midline 809.2
2183 Male, age 80, midline 801.2
Nucleus tractus solitarii
nTPM: 760.4
2191 Female, age 85, both hemispheres 794.9
2307 Male, age 80, both hemispheres 755.4
2656 Male, age 76, both hemispheres 749.8
2144 Female, age 91, right hemisphere 741.3
Parvicellular reticular nuclei
nTPM: 769.1
2119 Male, age 80, both hemispheres 776.5
2095 Male, age 76, both hemispheres 773.8
2558 Male, age 74, both hemispheres 757.0
Parvicellular reticular nuclei, medullary
nTPM: 780.1
2189 Female, age 91, both hemispheres 790.4
2181 Male, age 80, left hemisphere 779.0
2091 Female, age 85, both hemispheres 770.9
Peritrigeminal nucleus
nTPM: 804.2
2067 Female, age 85, both hemispheres 837.3
2136 Male, age 76, both hemispheres 796.8
2179 Male, age 61, both hemispheres 778.5
Prepositus hypoglossal nucleus
nTPM: 790.8
2855 Female, age 85, right hemisphere 795.1
2086 Male, age 80, both hemispheres 786.5
Spinal trigeminal nucleus, caudal
nTPM: 780.9
2312 Male, age 61, both hemispheres 795.2
2642 Male, age 74, both hemispheres 790.7
2308 Male, age 80, both hemispheres 787.1
2390 Female, age 91, both hemispheres 769.8
2447 Male, age 76, both hemispheres 761.9
Spinal trigeminal nucleus, interpolar
nTPM: 782.5
2033 Male, age 80, both hemispheres 800.0
2389 Female, age 91, both hemispheres 789.3
2386 Female, age 85, both hemispheres 776.7
2066 Male, age 76, right hemisphere 773.3
2625 Male, age 61, both hemispheres 773.2
Spinal vestibular nucleus
nTPM: 798.5
2384 Male, age 74, both hemispheres 815.1
2796 Male, age 61, both hemispheres 805.3
2780 Male, age 80, both hemispheres 802.5
2806 Female, age 85, both hemispheres 796.4
2748 Male, age 76, both hemispheres 789.1
2186 Female, age 91, both hemispheres 782.9
Ventral medullary reticular nucleus
nTPM: 789.3
2372 Male, age 61, both hemispheres 807.0
2060 Male, age 76, both hemispheres 771.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 803.1
2118 Male, age 80, both hemispheres 817.3
2302 Female, age 91, both hemispheres 812.6
2180 Male, age 61, both hemispheres 795.5
2741 Female, age 85, both hemispheres 795.1
1986 Male, age 76, both hemispheres 794.9

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 275.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 275.1
FF:10174-103C3 60 years, female 293.7
FF:10038-101F2 18-64 years, mixed 279.3
FF:10155-103A2 76 years, female 252.3

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 684.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 684.7
Samples: 4

Max nTPM: 831.2
Min nTPM: 571.0
Sample A Female 571.0
Sample B Female 572.0
Sample C Male 764.7
Sample D Male 831.2

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.3
69818379 Antisense, RP_050510_04_H09, Mouse strain C57BL/6J (56 days, male) 7.3

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