HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:202.5 nTPM
HPA:202.5 nTPM
GTEx:274.1 nTPM
FANTOM5:343.2 Scaled Tags Per Million
Pig:441.3 nTPM
Mouse:534.7 nTPM
Allen mouse:9.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012800Antibody CAB020812
Glial cells Not detectedLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 202.5
Sample id Sample description nTPM
Hippocampus
nTPM: 151.4
2621 Female, age 67, right hemisphere 205.9
1898 Male, age 80, left hemisphere 183.6
1855 Male, age 76, left hemisphere 182.6
2148 Female, age 91, left hemisphere 124.3
1911 Female, age 85, right hemisphere 113.6
2529 Female, age 94, left hemisphere 98.7
Dentate gyrus
nTPM: 164.3
1927 Female, age 91, both hemispheres 225.0
2530 Female, age 94, left hemisphere 219.2
2010 Male, age 76, both hemispheres 178.6
2531 Female, age 67, both hemispheres 144.1
2246 Female, age 85, both hemispheres 132.0
2528 Male, age 74, both hemispheres 87.0
Entorhinal gyrus
nTPM: 151.6
2613 Female, age 94, left hemisphere 244.7
2764 Male, age 80, right hemisphere 170.0
1938 Female, age 85, left hemisphere 164.2
1787 Male, age 76, left hemisphere 163.0
2686 Male, age 75, right hemisphere 94.6
2117 Female, age 91, right hemisphere 72.8
Hippocampus, CA1
nTPM: 192.4
2749 Male, age 80, left hemisphere 322.0
2045 Male, age 76, both hemispheres 223.5
1873 Female, age 85, both hemispheres 151.5
2082 Female, age 91, right hemisphere 149.2
2527 Male, age 74, both hemispheres 115.6
Hippocampus, CA2
nTPM: 144.4
1892 Male, age 76, both hemispheres 222.0
1963 Male, age 80, left hemisphere 182.2
2437 Female, age 94, left hemisphere 155.1
1940 Female, age 85, left hemisphere 120.1
2113 Female, age 91, right hemisphere 109.5
2249 Male, age 74, both hemispheres 77.6
Hippocampus, CA3
nTPM: 172.7
2620 Female, age 94, left hemisphere 250.0
2137 Male, age 80, left hemisphere 238.7
1867 Male, age 76, both hemispheres 180.2
2861 Female, age 67, both hemispheres 171.3
2436 Male, age 74, both hemispheres 103.7
1891 Female, age 85, both hemispheres 92.5
Parahippocampal cortex
nTPM: 135.8
2245 Female, age 91, both hemispheres 176.6
1850 Male, age 80, both hemispheres 155.4
2250 Female, age 67, right hemisphere 150.8
1933 Female, age 85, both hemispheres 144.9
2018 Male, age 76, both hemispheres 136.3
1990 Female, age 91, right hemisphere 135.7
2693 Female, age 94, both hemispheres 135.3
2622 Female, age 67, right hemisphere 125.5
2532 Female, age 72, left hemisphere 108.1
2692 Male, age 74, both hemispheres 89.0
Perirhinal gyrus
nTPM: 202.5
1847 Female, age 91, left hemisphere 249.6
2521 Female, age 94, right hemisphere 242.0
1794 Male, age 80, right hemisphere 211.4
1841 Female, age 85, right hemisphere 163.5
2848 Male, age 76, right hemisphere 145.8
Subiculum
nTPM: 109.4
1901 Male, age 80, both hemispheres 147.3
1977 Female, age 85, both hemispheres 131.4
2042 Male, age 76, both hemispheres 108.9
2438 Female, age 94, left hemisphere 104.3
2619 Male, age 74, both hemispheres 87.4
2729 Female, age 91, right hemisphere 77.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 274.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 274.1
Samples: 197

Max nTPM: 687.7
Min nTPM: 74.6
Std nTPM: 132.7
Median nTPM: 251.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 687.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 623.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 615.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 589.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 584.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 578.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 564.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 551.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 547.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 545.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 532.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 343.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 343.2
FF:10169-103B7 60 years, female 457.2
FF:10153-102I9 76 years, female 229.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 441.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 407.2
Samples: 4

Max nTPM: 521.7
Min nTPM: 275.5
Sample A Female 521.7
Sample B Female 479.2
Sample C Male 352.3
Sample D Male 275.5
Entorhinal cortex
nTPM: 368.7
Samples: 4

Max nTPM: 444.0
Min nTPM: 320.2
Sample A Female 444.0
Sample B Female 335.4
Sample C Male 375.1
Sample D Male 320.2
Subiculum
nTPM: 356.4
Samples: 4

Max nTPM: 451.2
Min nTPM: 289.3
Sample A Female 451.2
Sample B Female 299.4
Sample C Male 385.8
Sample D Male 289.3
Ventral hippocampus
nTPM: 441.3
Samples: 4

Max nTPM: 558.7
Min nTPM: 250.7
Sample A Female 443.2
Sample B Female 250.7
Sample C Male 558.7
Sample D Male 512.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 534.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 534.7
Samples: 4

Max nTPM: 591.5
Min nTPM: 472.5
Sample A Male 518.1
Sample B Male 556.5
Sample C Female 472.5
Sample D Female 591.5
Hippocampal formation
nTPM: 416.3
Samples: 4

Max nTPM: 446.5
Min nTPM: 390.7
Sample A Male 446.5
Sample B Male 414.6
Sample C Female 390.7
Sample D Female 413.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
77464848 Antisense, RP_070129_02_B12, Mouse strain C57BL/6J (56 days, male) 22.3
808 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 5.9
809 Antisense, RP_Baylor_102968, Mouse strain C57BL/6J (56 days, male) 4.3
810 Sense, RPS_Baylor_37025, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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