HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:1501.4 nTPM
HPA:1501.4 nTPM
GTEx:1118.8 nTPM
FANTOM5:13.7 Scaled Tags Per Million
Mouse:446.5 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1501.4
Sample id Sample description nTPM
Hippocampus
nTPM: 1501.4
1898 Male, age 80, left hemisphere 1532.0
2529 Female, age 94, left hemisphere 1527.0
2621 Female, age 67, right hemisphere 1495.7
2148 Female, age 91, left hemisphere 1485.7
1911 Female, age 85, right hemisphere 1484.5
1855 Male, age 76, left hemisphere 1483.5
Dentate gyrus
nTPM: 1492.5
2530 Female, age 94, left hemisphere 1527.2
2010 Male, age 76, both hemispheres 1525.1
2531 Female, age 67, both hemispheres 1502.8
2246 Female, age 85, both hemispheres 1467.7
2528 Male, age 74, both hemispheres 1466.3
1927 Female, age 91, both hemispheres 1465.9
Entorhinal gyrus
nTPM: 1495.3
2686 Male, age 75, right hemisphere 1539.7
2117 Female, age 91, right hemisphere 1522.1
1787 Male, age 76, left hemisphere 1498.9
2764 Male, age 80, right hemisphere 1477.3
1938 Female, age 85, left hemisphere 1475.2
2613 Female, age 94, left hemisphere 1458.3
Hippocampus, CA1
nTPM: 1478.2
2082 Female, age 91, right hemisphere 1509.3
2045 Male, age 76, both hemispheres 1504.0
2527 Male, age 74, both hemispheres 1466.7
1873 Female, age 85, both hemispheres 1465.0
2749 Male, age 80, left hemisphere 1446.0
Hippocampus, CA2
nTPM: 1482.4
1963 Male, age 80, left hemisphere 1501.3
2113 Female, age 91, right hemisphere 1498.1
2437 Female, age 94, left hemisphere 1493.2
1940 Female, age 85, left hemisphere 1477.5
1892 Male, age 76, both hemispheres 1475.0
2249 Male, age 74, both hemispheres 1449.6
Hippocampus, CA3
nTPM: 1474.9
2861 Female, age 67, both hemispheres 1516.5
1867 Male, age 76, both hemispheres 1501.4
1891 Female, age 85, both hemispheres 1481.2
2620 Female, age 94, left hemisphere 1457.7
2436 Male, age 74, both hemispheres 1452.7
2137 Male, age 80, left hemisphere 1439.8
Parahippocampal cortex
nTPM: 1469.7
2018 Male, age 76, both hemispheres 1565.9
2250 Female, age 67, right hemisphere 1472.2
1933 Female, age 85, both hemispheres 1470.2
2692 Male, age 74, both hemispheres 1465.2
2622 Female, age 67, right hemisphere 1464.5
1990 Female, age 91, right hemisphere 1463.1
2532 Female, age 72, left hemisphere 1461.7
2245 Female, age 91, both hemispheres 1458.6
1850 Male, age 80, both hemispheres 1449.4
2693 Female, age 94, both hemispheres 1426.1
Perirhinal gyrus
nTPM: 1460.2
1841 Female, age 85, right hemisphere 1472.1
1847 Female, age 91, left hemisphere 1468.9
1794 Male, age 80, right hemisphere 1459.2
2521 Female, age 94, right hemisphere 1453.1
2848 Male, age 76, right hemisphere 1447.8
Subiculum
nTPM: 1488.1
2042 Male, age 76, both hemispheres 1562.5
2729 Female, age 91, right hemisphere 1496.7
1977 Female, age 85, both hemispheres 1479.1
1901 Male, age 80, both hemispheres 1474.8
2619 Male, age 74, both hemispheres 1472.3
2438 Female, age 94, left hemisphere 1443.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1118.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1118.8
Samples: 197

Max nTPM: 2879.8
Min nTPM: 424.7
Std nTPM: 451.7
Median nTPM: 1004.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2879.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2824.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2710.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2440.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2374.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2301.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 2277.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2263.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2081.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2054.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1993.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.7
FF:10153-102I9 76 years, female 17.1
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 446.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 423.8
Samples: 4

Max nTPM: 454.3
Min nTPM: 395.3
Sample A Male 423.9
Sample B Male 421.8
Sample C Female 454.3
Sample D Female 395.3
Hippocampal formation
nTPM: 446.5
Samples: 4

Max nTPM: 509.0
Min nTPM: 409.7
Sample A Male 509.0
Sample B Male 409.7
Sample C Female 417.9
Sample D Female 449.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
72081492 Antisense, RP_051017_01_C08, Mouse strain C57BL/6J (56 days, male) 7.2
68633443 Antisense, RP_050125_02_H03, Mouse strain C57BL/6J (56 days, male) 6.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.