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RPS19
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  • RPS19
BRAIN WHITE MATTER Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
WHITE MATTER - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1619.6 nTPM
HPA:1619.6 nTPM
FANTOM5:15.1 Scaled Tags Per Million
Mouse:1097.2 nTPM

WHITE MATTER - Annotated protein expression
Pending normal tissue analysis

WHITE MATTER - HPA Brain RNA-seq
Max nTPM 1619.6
Sample id Sample description nTPM
Angular gyrus (white matter)
nTPM: 1548.5
1920 Male, age 76, both hemispheres 1548.5
Anterior funiculus (white matter)
nTPM: 1579.6
2734 Male, age 80, both hemispheres 1609.9
2818 Female, age 79, both hemispheres 1578.4
2819 Male, age 47, both hemispheres 1567.3
2193 Male, age 75, both hemispheres 1562.9
Area striata (white matter)
nTPM: 1509.3
2258 Female, age 91, left hemisphere 1509.3
Cerebellar white matter
nTPM: 1604.1
1837 Male, age 76, left hemisphere 1722.8
2174 Male, age 61, right hemisphere 1717.0
1931 Female, age 91, left hemisphere 1560.6
1864 Male, age 80, left hemisphere 1553.4
2105 Male, age 74, right hemisphere 1535.7
2773 Female, age 85, right hemisphere 1535.1
Corpus callosum, genu (white matter)
nTPM: 1559.8
1887 Male, age 76, left hemisphere 1619.0
1934 Male, age 61, right hemisphere 1601.7
1849 Female, age 91, right hemisphere 1568.1
1885 Female, age 94, left hemisphere 1555.9
2771 Male, age 75, left hemisphere 1525.8
1886 Female, age 67, right hemisphere 1488.5
Corpus callosum, splenium (white matter)
nTPM: 1582.1
1946 Male, age 76, left hemisphere 1633.9
2104 Male, age 75, left hemisphere 1600.4
2847 Female, age 67, right hemisphere 1555.3
2238 Female, age 94, right hemisphere 1538.8
Dorsal funiculus (white matter)
nTPM: 1578.5
2064 Female, age 79, both hemispheres 1601.4
2810 Male, age 90, both hemispheres 1588.5
2817 Male, age 47, both hemispheres 1584.0
2812 Male, age 66, both hemispheres 1563.9
2128 Male, age 75, both hemispheres 1554.7
Lateral funiculus (white matter)
nTPM: 1619.6
2294 Male, age 66, both hemispheres 1682.4
2094 Female, age 79, both hemispheres 1614.7
2192 Male, age 75, both hemispheres 1594.7
2099 Male, age 90, both hemispheres 1586.5
Occipital cortex (white matter)
nTPM: 1505.5
2259 Male, age 75, midline 1556.9
2257 Female, age 67, both hemispheres 1454.1
Parahippocampal cortex (white matter)
nTPM: 1531.5
2157 Female, age 91, both hemispheres 1531.5
Parieto-temporal junction (white matter)
nTPM: 1540.9
2121 Male, age 76, left hemisphere 1599.6
2774 Male, age 61, right hemisphere 1585.6
1935 Female, age 94, right hemisphere 1520.5
2770 Female, age 91, right hemisphere 1518.0
2469 Male, age 75, right hemisphere 1514.3
1999 Female, age 67, right hemisphere 1507.5
Somatomor cortex, precentral gyrus (white matter)
nTPM: 1460.4
2439 Male, age 75, right hemisphere 1460.4
Somatosensory cortex, postcentral gyrus, ventral (white matter)
nTPM: 1447.7
2623 Male, age 75, right hemisphere 1447.7
Temporal white matter
nTPM: 1592.2
2523 Female, age 94, left hemisphere 1686.6
1801 Male, age 76, left hemisphere 1637.9
2736 Female, age 91, right hemisphere 1570.7
2524 Female, age 85, left hemisphere 1569.7
2254 Male, age 75, right hemisphere 1495.8

WHITE MATTER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 15.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Corpus callosum
Scaled Tags Per Million: 15.1
FF:10042-101F6 24-68 years, mixed 15.1

WHITE MATTER - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1097.2
Mouse sample Sample description nTPM
Corpus callosum
nTPM: 1097.1
Samples: 3

Max nTPM: 1299.8
Min nTPM: 923.7
Sample A Male 1067.9
Sample B Male 923.7
Sample D Female 1299.8

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