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ABCA2
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:135.7 nTPM
HPA:135.7 nTPM
GTEx:195.8 nTPM
FANTOM5:348.0 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 135.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 106.8
2816 Male, age 47, midline 138.3
2194 Female, age 79, both hemispheres 129.8
1981 Female, age 72, midline 118.5
2565 Male, age 75, midline 78.3
2048 Male, age 55, midline 69.2
Cervical spinal cord, dorsal horn
nTPM: 135.7
2296 Male, age 66, both hemispheres 326.3
2173 Female, age 72, unknown 178.9
2069 Male, age 47, both hemispheres 113.6
1877 Male, age 55, unknown 102.5
2297 Male, age 75, both hemispheres 48.9
2721 Male, age 90, both hemispheres 44.1
Cervical spinal cord, ventral horn
nTPM: 134.8
2068 Male, age 55, unknown 188.7
2820 Female, age 79, both hemispheres 164.8
2098 Female, age 72, unknown 139.0
2480 Male, age 75, both hemispheres 111.8
2809 Male, age 90, both hemispheres 104.3
2295 Male, age 66, both hemispheres 100.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 195.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 195.8
Samples: 159

Max nTPM: 619.4
Min nTPM: 48.0
Std nTPM: 93.8
Median nTPM: 183.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 619.4
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 519.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 422.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 404.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 404.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 396.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 391.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 389.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 384.6
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 367.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 360.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 349.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 336.9
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 334.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 333.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 305.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 304.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 302.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 294.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 288.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 287.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 284.7
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 283.5
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 280.0
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 279.3
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 272.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 267.5
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 265.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 264.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 262.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 261.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 260.9
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 260.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 257.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 257.2
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 256.1
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 253.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 251.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 250.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 246.6
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 242.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 239.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 239.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 238.5
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 237.4
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 237.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 237.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 236.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 231.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 230.1
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 227.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 226.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 224.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 221.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 219.9
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 219.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 215.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 213.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 212.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 210.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 210.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 208.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 208.4
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 208.3
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 207.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 204.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 204.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 201.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 201.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 200.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 194.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 192.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 191.1
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 190.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 190.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 189.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 188.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 186.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 185.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 183.4
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 182.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 181.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 181.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 179.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 179.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 178.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 178.3
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 178.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 175.6
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 173.8
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 171.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 168.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 165.4
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 163.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 162.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 159.4
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 158.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 155.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 152.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 150.7
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 146.9
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 146.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 146.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 146.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 145.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 144.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 144.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 141.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 140.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 139.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 139.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 138.7
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 138.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 136.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 135.7
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 134.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 133.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 133.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 133.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 127.1
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 121.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 118.9
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 117.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 115.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 115.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 115.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 115.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 113.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 111.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 111.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 111.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 110.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 110.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 104.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 104.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 101.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 99.6
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 99.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 97.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 93.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 90.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 90.6
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 89.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 89.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 88.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 85.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 83.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 82.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 79.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 77.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 76.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 75.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 72.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 71.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 63.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 60.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 53.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 51.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 48.0
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 348.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 348.0
FF:10181-103D1 60 years, female 428.8
FF:10159-103A6 76 years, female 267.1

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