We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SPOCK2
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • SPOCK2
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: High
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Medium
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: High
Processes in molecular layer: Not detected
Processes in white matter: High
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: High
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Medium
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:160.4 nTPM
HPA:160.4 nTPM
GTEx:231.0 nTPM
FANTOM5:530.4 Scaled Tags Per Million
Pig:241.5 nTPM
Mouse:169.1 nTPM
Allen mouse:10.6 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044605
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane High
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane High
Purkinje cells - dendrites High
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Medium
Molecular layer cells - cytoplasm/membrane High
Molecular layer cells - nucleus Not detected
Processes in granular layer High
Processes in molecular layer Not detected
Processes in white matter High
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Medium
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max nTPM 160.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 160.4
2006 Male, age 61, right hemisphere 195.4
1769 Male, age 76, right hemisphere 185.6
1768 Female, age 72, unknown 178.1
2101 Male, age 74, right hemisphere 163.7
2055 Female, age 91, right hemisphere 163.4
1774 Male, age 80, left hemisphere 162.0
1788 Male, age 55, unknown 137.3
2003 Female, age 85, right hemisphere 97.7
Cerebellar nuclei
nTPM: 135.2
2177 Female, age 85, both hemispheres 197.9
2783 Female, age 72, unknown 171.9
2882 Male, age 76, left hemisphere 163.9
1966 Female, age 91, left hemisphere 139.9
1879 Male, age 55, unknown 131.9
2175 Male, age 61, right hemisphere 113.0
2005 Male, age 80, left hemisphere 107.2
1871 Male, age 74, unknown 102.5
2318 Male, age 74, left hemisphere 89.1
Flocculonodular lobe
nTPM: 159.5
1792 Male, age 74, unknown 181.4
1771 Male, age 80, left hemisphere 178.1
2004 Male, age 61, right hemisphere 161.9
2176 Female, age 91, right hemisphere 160.4
1767 Male, age 76, left hemisphere 159.9
1765 Male, age 55, unknown 145.4
1835 Female, age 85, right hemisphere 129.5
Vermis
nTPM: 155.6
2834 Male, age 80, left hemisphere 192.2
1770 Male, age 76, left hemisphere 179.2
1778 Female, age 91, left hemisphere 175.1
1751 Male, age 74, right hemisphere 166.0
1928 Female, age 72, unknown 155.7
1825 Male, age 74, unknown 146.0
1766 Male, age 55, unknown 142.2
1988 Female, age 85, left hemisphere 128.5
2460 Male, age 61, both hemispheres 115.8

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 231.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 216.5
Samples: 215

Max nTPM: 362.5
Min nTPM: 102.5
Std nTPM: 39.7
Median nTPM: 214.4
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 362.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 352.5
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 310.7
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 309.9
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 309.2
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 299.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 292.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 292.5
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 291.6
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 286.2
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 283.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 282.0
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 281.8
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 279.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 276.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 272.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 272.3
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 271.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 270.4
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 269.2
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 267.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 266.5
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 262.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 261.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 260.0
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 259.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 259.3
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 258.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 258.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 257.8
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 257.3
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 257.1
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 255.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 255.0
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 254.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 251.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 250.9
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 250.7
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 250.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 250.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 249.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 249.1
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 248.5
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 247.3
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 246.2
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 246.2
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 245.6
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 244.9
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 243.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 241.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 241.1
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 240.5
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 239.8
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 239.8
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 239.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 239.1
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 238.1
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 237.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 236.3
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 236.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 235.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 235.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 235.2
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 234.9
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 234.7
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 234.5
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 234.5
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 234.2
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 234.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 233.8
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 233.7
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 231.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 231.7
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 231.6
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 231.3
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 231.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 230.9
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 230.9
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 229.8
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 229.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 229.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 228.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 228.2
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 227.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 227.4
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 226.0
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 226.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 225.1
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 224.3
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 223.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 222.8
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 221.2
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 220.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 220.6
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 220.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 219.9
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 219.5
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 219.3
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 219.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 219.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 218.6
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 218.6
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 217.8
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 216.6
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 215.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 215.4
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 215.2
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 214.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 213.9
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 213.5
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 211.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 211.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 211.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 211.3
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 211.3
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 211.0
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 211.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 210.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 209.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 209.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 208.9
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 208.6
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 207.5
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 206.5
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 206.1
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 205.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 205.2
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 204.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 204.7
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 204.5
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 203.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 203.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 203.5
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 203.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 203.2
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 203.1
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 202.1
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 201.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 200.1
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 199.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 199.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 198.9
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 198.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 197.7
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 197.6
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 197.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 197.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 197.3
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 197.1
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 196.0
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 195.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 193.7
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 193.5
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 193.4
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 193.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 193.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 192.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 191.8
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 190.6
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 190.2
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 190.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 189.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 188.7
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 188.4
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 188.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 187.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 187.4
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 187.4
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 185.3
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 184.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 183.8
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 183.2
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 182.7
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 182.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 182.5
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 182.5
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 180.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 180.4
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 180.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 180.1
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 179.9
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 178.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 177.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 177.3
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 177.2
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 176.0
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 175.6
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 175.5
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 174.4
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 174.3
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 171.1
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 170.3
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 170.3
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 169.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 169.9
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 169.7
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 169.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 167.1
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 164.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 161.5
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 160.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 159.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 158.8
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 158.2
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 154.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 154.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 148.4
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 147.2
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 143.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 142.5
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 142.1
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 136.6
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 130.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 117.8
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 102.5
Show allShow less
Brain - Cerebellum
Average nTPM: 231.0
Samples: 241

Max nTPM: 398.2
Min nTPM: 113.1
Std nTPM: 38.8
Median nTPM: 229.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 398.2
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 328.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 320.7
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 317.3
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 316.0
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 313.3
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 312.5
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 312.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 309.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 306.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 305.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 304.8
GTEX-17HII-2926-SM-79OMK 50-59 years, male 304.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 304.0
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 288.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 286.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 286.6
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 286.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 285.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 282.6
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 279.3
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 279.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 277.9
GTEX-1B933-3026-SM-731DB 50-59 years, female 277.6
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 276.8
GTEX-12126-0926-SM-5FQTW 20-29 years, male 276.3
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 274.7
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 274.6
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 273.7
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 272.4
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 272.4
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 270.5
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 269.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 269.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 267.6
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 267.4
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 266.4
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 266.3
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 266.2
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 265.9
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 265.8
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 265.8
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 265.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 265.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 265.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 265.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 265.2
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 264.4
GTEX-15G19-2826-SM-6M48K 60-69 years, male 262.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 262.3
GTEX-1192X-3226-SM-5987D 50-59 years, male 260.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 260.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 260.1
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 259.5
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 259.0
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 258.9
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 258.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 257.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 256.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 256.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 256.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 255.8
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 254.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 254.7
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 254.7
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 253.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 252.4
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 252.4
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 252.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 252.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 251.5
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 250.2
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 249.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 249.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 248.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 248.1
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 247.6
GTEX-14ABY-3026-SM-664NE 50-59 years, male 247.3
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 247.3
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 247.0
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 246.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 246.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 244.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 244.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 244.1
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 243.8
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 243.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 242.9
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 242.4
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 242.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 241.1
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 240.6
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 240.4
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 239.9
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 239.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 238.8
GTEX-145LS-3026-SM-5O99S 60-69 years, female 238.8
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 238.6
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 238.2
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 236.4
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 236.3
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 236.1
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 235.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 235.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 235.5
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 235.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 235.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 234.0
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 233.7
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 232.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 232.2
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 231.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 231.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 231.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 231.2
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 231.0
GTEX-11ONC-3026-SM-5985W 60-69 years, male 229.9
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 229.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 229.6
GTEX-17EVP-2926-SM-793BU 40-49 years, male 229.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 229.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 229.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 228.0
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 227.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 227.6
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 226.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 226.6
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 224.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 224.2
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 224.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 223.3
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 223.0
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 222.8
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 222.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 222.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 222.2
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 222.0
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 221.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 221.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 221.6
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 221.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 221.1
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 220.9
GTEX-18465-2926-SM-7KFSE 50-59 years, male 219.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 219.1
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 218.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 218.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 218.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 218.1
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 217.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 216.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 216.8
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 216.5
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 216.5
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 216.2
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 215.6
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 215.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 214.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 214.5
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 214.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 213.9
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 213.3
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 213.2
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 212.8
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 212.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 212.1
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 211.2
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 210.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 210.9
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 210.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 210.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 209.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 209.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 208.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 208.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 207.2
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 206.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 205.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 205.7
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 205.7
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 205.5
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 205.0
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 204.8
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 204.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 203.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 202.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 202.1
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 201.9
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 201.3
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 200.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 200.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 200.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 200.0
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 199.6
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 198.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 198.3
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 198.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 197.9
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 197.1
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 196.7
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 196.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 196.1
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 195.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 192.8
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 192.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 192.4
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 192.3
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 190.4
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 190.0
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 189.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 189.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 189.2
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 187.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 187.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 187.4
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 186.4
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 185.6
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 185.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 185.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 185.2
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 184.1
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 183.8
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 180.8
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 179.7
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 177.6
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 175.9
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 174.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 174.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 174.2
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 173.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 169.5
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 168.0
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 162.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 159.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 157.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 157.0
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 151.7
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 147.4
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 140.8
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 137.8
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 113.1
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 530.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 530.4
FF:10083-102B2 22-68 years, mixed 665.2
FF:10166-103B4 76 years, female 395.7

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 241.5
Pig sample Sample description nTPM
Cerebellum
nTPM: 241.5
Samples: 4

Max nTPM: 421.2
Min nTPM: 145.7
Sample A Female 421.2
Sample B Female 208.8
Sample C Male 145.7
Sample D Male 190.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 169.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 169.1
Samples: 4

Max nTPM: 183.4
Min nTPM: 152.8
Sample A Male 183.4
Sample B Male 152.8
Sample C Female 180.1
Sample D Female 160.1

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 10.6
69262230 Antisense, RP_050301_01_F10, Mouse strain C57BL/6J (56 days, male) 14.1
70812774 Antisense, RP_050712_02_E12, Mouse strain C57BL/6J (56 days, male) 7.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.